KEGG   Dendroctonus ponderosae (mountain pine beetle): 109540544
Entry
109540544         CDS       T04899                                 
Name
(RefSeq) ATP-dependent RNA helicase p62-like
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109540544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpa03041]
    109540544
   03009 Ribosome biogenesis [BR:dpa03009]
    109540544
Enzymes [BR:dpa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109540544
Spliceosome [BR:dpa03041]
 Complex A
  U1 snRNP components
   U1 related factors
    109540544
 Complex B
    109540544
Ribosome biogenesis [BR:dpa03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    109540544
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 Cas3-like_C_2 CMS1
Other DBs
NCBI-GeneID: 109540544
NCBI-ProteinID: XP_048517106
Position
Unknown
AA seq 545 aa
MSYRNQTGYGNGNGYRPRQNGFESRGSNGNFGQRNGNWNNNQWGDSRQSGNYGDKGNFAG
DKLHNVEWANKTLRPFKKDFYVEHDIIGQRSDEEVKKYCLEKGITVQGKAPKPIQSFHEA
NFPDYVLDAVVAQGYEYPTSIQAQGWPIALSGQDMVGIAQTGSGKTLAYILPAIVHINNQ
CDVQRGEGPIVLILAPTRELAQQIQQVAHAFGKTSRIRNTCVFGGAPKGPQARDLERGVE
ICIATPGRLIDFLERGTTNLERCTYLVLDEADRMLDMGFEPQIRKVLSQIRPDRQTLMWS
ATWPKEVKKLALDFMKSYVQLNVGSLELSANHNIMQIVDVCQEHEKDIKLNNLLQEIAIT
LDPASKIIIFVETKKKVEGVTRNIRGSGWRAVSMHGDKSQDQRDYVLKEFRNGKASILVA
TDVAARGLDVDGIKYVVNYDYPHSSEDYIHRIGRTGRCNSTGTSYAFFTPSNSKHAKDLI
SVLQEAKQIVDPKLQEMARNSYNGKPNRWGARPFKARQNGISSQKSGYGGFRNNGYNGYS
KINGY
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgtcttatagaaaccaaactgggtacggaaacggtaatggatatcgtcctcgtcaaaat
ggattcgaatcgcgaggctccaatggcaacttcggccaacgtaatggaaattggaacaac
aatcaatggggtgatagcaggcaaagtggaaactacggcgacaaaggcaattttgcaggg
gacaagctgcacaatgtcgagtgggcaaacaaaactcttcgtccctttaagaaggatttt
tatgttgaacatgatatcattggacaaagatcagatgaagaggtgaagaagtactgcctg
gaaaagggaataaccgttcaaggcaaagcccccaaacctattcaaagtttccacgaggcc
aattttcctgattatgtgcttgatgctgtagtggcgcaaggctatgagtatcccacctcc
attcaagctcaaggctggcccattgctctcagtggccaggacatggtgggaatagctcaa
acaggatcgggaaaaactcttgcctacatactgccagctatcgtgcatataaacaatcaa
tgtgatgttcaaagaggagaagggccgattgttctaattttagcccccacgagggaattg
gctcagcagattcaacaagttgcgcacgcctttggcaagacgtcccgaattcgcaatacc
tgcgtctttggcggagcccccaaaggaccccaagctagagatctggaacgcggcgttgaa
atctgcattgctacacctggtcgattgatcgactttttggaaagaggaactaccaacttg
gagcgatgcacttacttggtgttggatgaagccgacaggatgctagatatgggctttgag
ccccaaattcgcaaagttttgagtcagattcgacctgaccgccaaacattaatgtggtct
gccacctggccaaaagaagtaaaaaaattggctttagacttcatgaagtcctatgtccaa
ctaaatgttgggtcgctggagttatcagctaatcataatattatgcagatcgttgatgtt
tgtcaagagcacgaaaaagatatcaaattgaacaacttgctgcaggagattgcgatcact
ctggacccggcatccaaaatcattatcttcgtcgaaaccaagaaaaaagtggaaggcgta
acacgcaatattagaggatccggatggcgagctgtgtcgatgcatggcgacaaaagccaa
gatcaacgggactatgtgttgaaagaattcagaaatggcaaagcttcgattttagtagcc
actgatgttgccgcaagaggattagatgtagacggaattaagtacgttgtcaactatgat
tacccacattcgtccgaagattatattcatcgaatcggaagaactggccgatgcaattcc
acgggaacttcatatgcgttctttactccctctaattccaagcatgctaaagatttaatt
tctgtcctgcaagaggctaaacagattgttgacccaaagttgcaagagatggcccgcaat
agctacaacggtaagccaaatagatggggcgcaaggcctttcaaggcaagacagaatgga
atatcgtcccaaaagtccgggtatggcggattccgcaataatggatacaatggatattcc
aaaattaatggttactaa

  All links  
Gene (18)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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