KEGG   Dendroctonus ponderosae (mountain pine beetle): 109543601
Entry
109543601         CDS       T04899                                 
Name
(RefSeq) protein CASC3 isoform X2
  KO
K14323  protein CASC3
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03013  Nucleocytoplasmic transport
dpa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109543601
   03015 mRNA surveillance pathway
    109543601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpa03019]
    109543601
Messenger RNA biogenesis [BR:dpa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109543601
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 109543601
NCBI-ProteinID: XP_019768961
UniProt: A0AAR5Q736
Position
Unknown
AA seq 621 aa
MADQDNVEKTPDESQESPAVAEAAVKEKTSSEISEYDSVDSYSDDDEQPIGKARSKASGL
DSQSETEDCAALEREEGDGQESVPQKKVDDDEDKKNPQYIPKRGTFYEHDDRTAEDLENQ
EEAEPEKVDKDGKKKIWDKEGRWGHDRFNDQEQSPKSPSELIAIYGYDIRNEEGPPKARR
RRRYGRGPNKYTRNWEDEDAYGKPVPARPPKPAKKERPRNSEEFPPLGANSDRARLKSPS
DSNGDNIEAQENNMQASRASIERQDPKKEQAVEQNQPPASHNPNSSRQAPEQRNLQPEQG
SGRFNQPQKVGTGRIIAPKKEIKDSDYKGFTTKTRQQRSVRSENQKVLPPRNLKKENEYI
QSQNFSNKNSNQNQIAEMEREISSLNIQDGVYKGKRTSAGSNNNNKPNANNQNRQGSVPP
RLQNSEPKGSKRYSSLRQRSLPETNAPPVPANFSFYPNDYNSAAPPPATQQPILPSSIPP
AGLVPPQVPVSAAPPLLQAPFPAAAAFAAPAPPQAFLQGPPPPFIAAPPAQPQLVSYVTQ
AQPAFVQGYQGQFNAVTQPADLYQPQGGITYYSADQQIAQRPVPLRRPKAAIPIVAPTNF
KDQIQRDDVSCSTGEATPVSE
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggctgatcaggataatgtggagaaaacccccgatgagagccaggagagccctgcggtg
gctgaggctgcagtgaaggaaaagacttcgtctgagatctcagagtacgacagcgtggat
agttacagtgacgatgatgagcaacctattggaaaagcccgttctaaggcatctggattg
gattcccaatcggaaacagaagactgtgcggctcttgaacgtgaagaaggtgatggccaa
gaaagcgttccacagaagaaggtggatgatgatgaggacaagaagaacccgcagtacatc
ccaaagcgaggaactttctatgaacatgacgaccgaacagctgaggacttagagaatcag
gaagaagccgaaccggaaaaggtggacaaagacgggaaaaagaaaatctgggacaaagag
ggaagatggggccatgatcggttcaacgatcaagagcagtcgcctaagtcgccttccgaa
ttgattgccatctatggttatgatattcgcaatgaagaaggccctccaaaggcaagaagg
cgcagaagatatggccgcggcccgaataagtacactcgaaactgggaggacgaagacgcc
tatgggaagcctgttccagctcgcccaccaaagcccgctaagaaagagcggcccagaaac
tctgaggagtttcctcctttaggagccaacagcgatcgcgcccggctaaagtccccctca
gactctaatggcgataacatcgaagctcaggaaaacaatatgcaagcttcaagagcgtca
attgagagacaagacccgaagaaagagcaagcagtggagcaaaatcagcctccggcatcg
cacaatcccaactcgtcgagacaagcgccagaacaacgaaacttgcagccggaacaaggt
tccggtaggttcaaccagccccagaaagtgggaactgggagaataatcgcccctaagaag
gaaatcaaggactctgattacaagggttttacgaccaaaacccggcagcagcgcagcgtt
agaagcgaaaatcaaaaagtgcttcccccaaggaacctcaagaaggagaacgagtacatt
caatcgcaaaacttctccaacaagaacagcaatcaaaatcagatcgctgaaatggaacgg
gagatcagtagtctgaatatacaagacggggtctataagggcaagcgaaccagcgcgggc
agcaataataacaacaagccaaacgcaaacaaccagaacagacaggggagcgttccgccc
cgtttacagaacagtgagcccaaaggctcgaagcgctacagctcattgaggcaacgatcg
ctccccgaaaccaacgcgccgccagtgccagctaatttcagcttctacccaaatgattac
aattcggcggccccgcccccagcaacacaacaaccaatcctgccctcatctattccccct
gcaggtttagtgccgccccaagtgcctgtaagtgcagcgccgcccttgctgcaggccccg
tttcccgcggcggctgcttttgcagcgccggcgccccctcaggccttcctgcagggccca
ccgcccccttttatcgcagcaccgcctgcgcagccccagctagtcagttacgttacgcag
gcacagccagctttcgtgcagggctaccagggacagtttaacgctgttacacagccagct
gatttgtatcagccacagggaggcataacgtactactcggctgatcagcaaatcgcacaa
cggccggttcctttaaggagacctaaagcggccatccctatagtcgctcccacgaacttc
aaagatcagattcaaagggatgatgttagttgtagtactggtgaagcgactccagtgagc
gaatga

  All links  
Gene (100)   
   RefGene (97)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (106)   

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