KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_300962
Entry
DAPPUDRAFT_300962 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_300962
Spliceosome [BR:dpx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    DAPPUDRAFT_300962
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    DAPPUDRAFT_300962
SSDB
Motif
Pfam: MA3 MIF4G Cnd1 Hema_stalk
Other DBs
NCBI-ProteinID: EFX69428
JGI: Dappu1_300962
UniProt: E9HFQ4
Position
Unknown
AA seq 728 aa
MDPVLTRTGGAYIPPAKLRMMQAQITDKSSLAFQRLSWEALKKSIHGLINKVNVSNIPLI
ITSLFKENIVRGRGLLTRSIIQAQAASPTFTHVYAALAALINSKFPNIGELLLSRLILQF
RRGFRRNDKQICMSSTRFIAHLVNQQVAHELLALEILTLLLENATDDSVEVAVGFLKECG
QKLGEVSPRGLTAVFDRLRHVLHEADLDKRVKYMIEVMFQVRKDGFKDNPAIVEDLDLVE
EEDQFTHLMSIQEEELDPQDMLNVFKHDPDYEANEEKYQAVKTEIIGDDSGESDGSGEEN
DESDGDSASEEEAKEQGDIVDETETNLIALRRVIYLTIQSSLDHNECAHKMMKMQMKPGQ
ETELCHMILDCCTQQRTYEKFFGLLAQRFCQINKAYIPPFEQIFHDTYDTIHRLDTNKLR
NVAKMFAHLLFTDAISWQVMANIRLTEEDTTSSSRIFLKILFQEMAEYMGLSKLNLRLKD
PTLQPYFEGVFPRDDPRNTRFAINFFTSIGLGGLTDELREHLRTHPKPPPITVPAPVSSL
SAAAAQLLLEDSDSDSSSSSSSSSSSSSSSSSSSSSTSSSSSSDGKTKKKTSRSSRRSND
RTSKSVSRSTDKPREDSKLSSKHADDGSREDRPKRIERSRREEHSRKEEYSRREDHSRRE
DHSRKEEHSRQEGRRRTESNEGKRTERRTRTPEDKGRDPKYPDDQGKSKSSRHRQDYEDE
FKSRHSRR
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggatccagtgctgacacgaaccggaggagcttacattcctcctgccaagttaagaatg
atgcaagcccaaataactgacaagtcaagcttagcttttcagcgtttatcttgggaggct
ctcaaaaaatccattcatgggttaatcaataaagtcaatgtgtcaaatatcccattgatt
ataacatccttgttcaaagaaaatattgttaggggacgtggtcttctaactaggtccata
attcaggcacaagctgcatcaccaacatttacacacgtctatgcagcccttgctgcattg
atcaattccaaatttcctaacataggtgaactgctattatctcgccttattcttcaattt
cgccgcgggtttcgtcgaaatgacaaacaaatatgtatgagttcgacaagattcatagca
catctggtgaaccaacaagtggcacatgagctattggctctagaaattttaactcttcta
ttagaaaatgcaactgatgattcagttgaagtcgcggttggatttttgaaagaatgtggt
caaaagttaggtgaagtctcccctcgaggattaactgccgtcttcgatcgcctccgtcat
gttttacacgaagctgacttagacaaacgcgtgaagtacatgattgaagtaatgtttcaa
gtacgaaaggatggctttaaggacaaccctgctatcgtggaagatttggatttggtggaa
gaagaagatcaattcactcatttgatgtcgatacaagaagaagaattggatccccaggat
atgttgaatgttttcaagcacgacccggattatgaagccaacgaagaaaagtaccaagct
gtcaaaacagaaattattggagatgattcgggcgaatcagacggttctggagaagaaaat
gatgaatctgatggagatagtgcttcggaggaggaagcaaaagaacaaggcgatattgtt
gacgagacggagacaaatcttattgctcttcgacgcgttatttaccttactattcagagc
agtttagatcacaatgaatgtgctcataaaatgatgaaaatgcaaatgaaacctggacaa
gaaactgagttatgccatatgatcttggattgctgcacccaacaaaggacgtatgaaaaa
tttttcggccttttagcccagaggttttgccagattaataaggcatacataccaccattc
gagcaaatatttcatgatacatacgacacaattcatcggctggatactaacaagcttcgc
aatgtagccaaaatgtttgcccatttacttttcacagacgccatcagttggcaagtgatg
gctaacattagactaactgaagaagatactacaagctcttcgagaatatttcttaaaatt
ttatttcaagaaatggcagagtacatgggtctcagcaagctaaatcttcgcctcaaagac
ccgactttgcaaccgtattttgaaggagttttccctcgcgatgatcctcgcaacactcga
tttgccattaatttctttacttccatcggtctaggagggttgacagacgaacttcgggaa
catcttcggactcaccctaagccgccgccaattactgttccagcaccagtgtcctcattg
tcagctgccgctgcacagttgttattggaagattctgattcagattcaagttcatcgtcg
tcttcatcttcctcgtcatcatcatcttcgtcttcatcatcgtcatcaacatcttcatca
tcgtcctcagacggaaaaacgaaaaagaaaacttctcggtcaagtcgtcgttcaaatgat
agaacctcgaagtctgtgagtcgttcgactgacaaacctcgcgaagacagtaaacttagt
agcaaacatgctgacgatggttctcgtgaagatcgacctaaaagaattgagcgttctcgc
agagaggaacattctcgcaaggaagaatattctcgcagagaggatcattctcgcagagag
gatcattctcgcaaggaagaacattctcgccaagagggtcgacgccgcactgaatccaac
gaagggaaacgaactgaaagaagaaccagaactccagaagacaaaggacgtgaccctaaa
tatccagatgatcaagggaaaagtaagagcagtagacacaggcaggattatgaagatgaa
ttcaaaagtcgtcattcccgtcgatag

  All links  
Gene (63)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (68)   

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