KEGG   Daphnia pulicaria: 124329095
Entry
124329095         CDS       T08670                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
dpz  Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpz03041]
    124329095
Spliceosome [BR:dpz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    124329095
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    124329095
SSDB
Motif
Pfam: MA3 MIF4G Cnd1 DUF4042
Other DBs
NCBI-GeneID: 124329095
NCBI-ProteinID: XP_046644038
Position
3:9056964..9060933
AA seq 528 aa
MDPMLTXTGGPYIPPAKLRMMQAQITDKSSLTFQRLSWEALKNXIHGLINKVNVPNIPSI
ITSLFKENNQNIVRGRGLLTRSIIQAQAASPTFTHVYAALAALINSKFPNIGELLLSRLI
LQFRRGIRRNDKQICISSTRFIAHLVNQQVAHELLALEIVTLLLENATDDSVEVAVGFLK
ECGQKLGEVSPRGLTAVFDRLHHVLHEADMDKRIKYMIEVMFQVRKDGFKDNPAIMEDLD
LVEDKNQFTHLMSIQEEELDPQDMLNVFKHDLDYEANEEKYLAVKKEIIGDNSGESDGSG
EENDESNSEEESKGDIVDETETNLIDLRRVIYLTIQSSVDHNECAHRIMKIQMKPGQETE
LCHMILDCCTQQRTYEKFFGLLAQRFCQINKAYIPPFEQIFHDAYDTIHRLDTNKLRNVA
KMFARLLLTDTISWQVMANIRLTEEDTTSSSRIFLKILFQEVTECMGLSKLNLRLKDPTL
QPYFEGVLHRDDPRNTRFAINFFTSIGLGGLTDELREQLRNHPKPLRK
NT seq 1587 nt   +upstreamnt  +downstreamnt
atggatccaatgctgacatgaacaggaggaccttacattcctcctgcaaagctaagaatg
atgcaagcccaaataactgacaagtcaagcttgacttttcagcgtttatcttgggaagct
cttaaaaatntcattcatgggttaatcaacaaagtcaatgtgccaaatatcccatcgatt
ataacatccttgttcaaagaaaataatcaaaatattgtaaggggtcgtggtcttctaact
aggtccatcattcaggcacaagctgcatcaccaacatttacacatgtctatgcagccctt
gctgcattgatcaattccaaatttcctaacatcggtgaactgctattatctcgccttatt
cttcaatttcgtcgcgggattcgtcgaaatgataaacaaatatgtatcagttcgacaaga
ttcatagcacatttggtgaaccaacaagtggcacatgagctattggctttagaaattgta
actcttttattagaaaatgcaactgacgattcagttgaagtcgcagttggatttttgaaa
gaatgtggtcaaaagctaggtgaagtctcccctcgaggattaactgccgtcttcgatcgc
ctccatcatgttttacacgaagctgacatggacaaacgcataaagtacatgattgaagta
atgtttcaagtacgaaaggatggctttaaggacaaccctgctatcatggaagatttggat
ttggtggaagacaagaatcaattcacacatttaatgtcgatacaagaagaagaattggat
ccccaagatatgttgaatgttttcaagcacgacctggattatgaagccaacgaagaaaag
tacctagctgtcaaaaaagaaatcattggagataattcgggcgaatcagacggttctgga
gaagaaaacgatgaatctaattcggaggaggaatcaaaaggcgatatagttgacgagacg
gagacaaaccttattgatcttcgacgcgttatttaccttactattcagagcagtgtagat
cacaatgaatgtgcccatagaattatgaaaattcaaatgaaacctggacaagaaactgag
ttatgccatatgatcttggattgctgcacccaacaaaggacgtatgaaaaatttttcggc
cttttagcccagaggttttgccagatcaataaggcgtacataccaccattcgagcaaatt
tttcatgatgcatacgacacaattcatcggttggataccaacaagcttcgcaacgtagcc
aaaatgtttgcccgtttacttctcacagacaccatcagttggcaagtgatggctaacatt
cgactaactgaagaagatacaacaagctcgtcgagaatttttcttaaaattttatttcaa
gaagtgacagagtgcatgggtctcagcaagctaaatcttcgcctcaaagacccgactttg
caaccgtatttcgaaggagttttacatcgcgatgatcctcgcaacactcgatttgccatt
aatttctttacttccatcggtttaggaggtttgacagacgaacttcgggaacaacttcgg
aatcaccctaagcccctgcgaaaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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