KEGG   Danio rerio (zebrafish): 386701
Entry
386701            CDS       T01004                                 
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
  KO
K07375  tubulin beta
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04145  Phagocytosis
dre04517  IgSF CAM signaling
dre04540  Gap junction
dre04814  Motor proteins
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    386701 (tubb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    386701 (tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    386701 (tubb5)
  09142 Cell motility
   04814 Motor proteins
    386701 (tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    386701 (tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    386701 (tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    386701 (tubb5)
   04147 Exosome [BR:dre04147]
    386701 (tubb5)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     386701 (tubb5)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    386701 (tubb5)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   386701 (tubb5)
  Exosomal proteins of colorectal cancer cells
   386701 (tubb5)
  Exosomal proteins of bladder cancer cells
   386701 (tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 386701
NCBI-ProteinID: NP_942113
ZFIN: ZDB-GENE-031110-4
Ensembl: ENSDARG00000037997
UniProt: Q6NW90 A0A8M1PB93
Position
16:10602102..10610724
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEDDA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggagattgttcacatccaagccggtcagtgcggaaaccaaatcggtgccaagttt
tgggaggtgatcagcgatgaacatggaatcgacccaaccggaacctatcatggagacagt
gacctccagctggacagaatcagtgtctactacaatgaggctacaggaggtaaatatgtg
ccaagagccattctagtggatctggagcctggtaccatggactctgtgcgttcagggccc
tttggacagatctttagacctgacaactttgtatttggacagagcggtgctggtaataac
tgggccaagggccactacacggaaggtgccgagcttgtagattcagttctggatgtggtc
cgcaaggagtccgagagctgtgactgcctgcagggcttccagctcactcactccctcggc
ggtggaaccggctccggcatgggtaccctgctgatcagcaaaatccgcgaagagtaccca
gaccgcatcatgaacaccttcagcgtggtgccttcgccaaaggtctctgacaccgtagtg
gagccttacaacgccacgctgtcggttcatcagctggtggagaacacagacgagacctac
tgcatagacaatgaagccttatatgatatctgcttccgcaccctcaaactcaccaccccc
acatatggcgacctcaaccatcttgtgtctgccaccatgagtggtgtcaccacctgcctg
cgcttccccggccagctcaacgccgaccttcgcaagttagccgtcaacatggtgccattc
ccccgtctgcacttcttcatgcccggcttcgctcctctgacaagccgaggcagccagcag
taccgcgccctcaccgtgcctgagctcacgcagcaagttttcgacgccaagaacatgatg
gcggcctgcgacccaagacatgggcgctacctgaccgtcgccgcggtcttccgaggccgc
atgtctatgaaggaagtggacgagcagatgctgaacgtccagaacaagaacagcagctac
ttcgtggaatggatccccaataacgttaaaaccgccgtctgcgatattccacctaggggt
ctcaaaatggccgtcacctttattggtaacagcacggccatccaagagctgttcaagcgt
atctccgagcagttcacggctatgttcaggcgtaaggctttcctgcactggtacacgggc
gaggggatggacgagatggagttcaccgaggccgagagcaacatgaatgacctggtgtcc
gagtaccagcagtaccaggacgccaccgccgaggaagagggcgaattcgaggaagaagcc
gaggatgatgcttaa

  All links  
Gene (496)   
   RefGene (491)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (514)   

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