KEGG T07348: 119462734

Dermacentor silvarum: 119462734

Entry

119462734         CDS       T07348

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1

K13100

pre-mRNA-splicing factor CWC22

Organism

dsv Dermacentor silvarum

Brite

KEGG Orthology (KO) [BR:dsv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dsv03041]
    119462734
Spliceosome [BR:dsv03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    119462734
Complex C
   U4/U6.U5 tri-SnRNP related factors
    119462734

SSDB

Motif

Pfam:

MA3 MIF4G HEAT_5MP1_2 Cnd1 PRP38 DUF7026 INTS7_N

Other DBs

NCBI-GeneID:

119462734

NCBI-ProteinID:

XP_049523770

Position

1:complement(50887176..50967660)

AA seq 1007 aa
MADGEQALERKAPRDPDCLLLGDESPLQEDVTGEKTSDSQDGPKQWDNFPWDRWSRERST
DSRERSVDSRDSATRERDLRYAEERKRDRERGRREEVILYRHRDSESTQSDSTEEEEAES
SNESQVKAPTSTAVNESAENKRTFSQEATPVSQSHAERTEHSAALTKHTHQRAAKTTKSP
PTSKEATKRTELAKESSEGTPCVANKRNGTTADQKGSGDSHSKTSRNGTKGPPGKEDRRV
VSDQSSGSEDDHVRHTDHDRRKERRREADVDHKRDDPERRRSDGTHDRQRDSDHHRRQDR
GHDRRREHDRNRDRDRKESHDQGWRGDQHRREDHKHSRREGRSESYRDENSRRDDYRNDR
DRSQRDEQKDHQRDDRRDERRGDSRSDRRRDDRRDDRRGDRRDDEQSGDLRTEHSGRGGR
EEAVGHKRVRRSSPDTEAEPPRKKDVITGRTGGAYIPPARLRMMQQQITDKSSVEYQRIA
WEALKKSINGLVNKANVGNIDVIIKELMRENLVRGRGLLCRTIMTAQAASPTFTHVYAAM
VAVINTRFPQTGELILKRLVIQFRRSFRRNDKLTCMASVRFIAHLLNQQVAHEVLALEIL
TLLLGNPTDDSVEVAVAFLKECGMKLTELTPKGVHAIFERLRSILHEANLDKRVQYMIEV
MFAIRKDGFTAHPSVVKELELVEEESQYTHLLALDDTLDGEDMLNVFKFDPEFAENEERY
AEIAKDILGSDDEGDGSGGDDSDDEEEEEDQAEENGEIIDNTETNLVALRRTIYLTIQSS
LNFEECAHKLLKLELKPGQVSEMCHMILDCCAQQRTYEKFFGLLAQRFCQLKKEYAEPFE
QIFLSSYDTIHRFETNKLRNVAKFFAHLLFTDAIPWNVLSHIKLTEDDTTSSSRIFIKIL
FQELCEYMGLPKLNERIKDPTLQDAFEGLFPRDLPKNTRFAINFFTSIGLGGLTADLREH
LKSAPKPAPVTDVIAAPAAAAKKKSTSSSSDSSSGSSSSDSGSESSS

NT seq 3024 nt +upstreamnt +downstreamnt
atggccgatggagagcaagcactggaacgtaaagcacccagagatccagactgcctgcta
ctgggagacgagagtcctctgcaagaggatgtgactggtgaaaaaacatctgactcccag
gacgggccaaagcagtgggacaacttcccttgggatagatggtcacgtgagaggagcaca
gactccagggaaaggagtgtggactcgcgtgactcagccacaagggagagggatctccgg
tatgctgaagaacggaaacgtgaccgtgagcgtggccggcgggaggaggtcatcctatat
cgtcacagagactctgaaagcactcagagtgatagtactgaagaggaggaggcagaaagc
tcaaatgaaagccaagtgaaggctcccacatccactgctgtgaatgaaagtgctgaaaac
aaaagaacattctcacaggaggccactcctgtatcacagagccatgctgaaaggactgag
catagtgcagcactgacaaagcacacccatcagagggcagccaaaactaccaagagtcca
ccaaccagcaaggaagccacaaagcgaacggaacttgccaaagagtccagtgagggtact
ccatgtgtggctaacaagagaaatggaactactgctgatcagaaagggtctggtgacagt
cacagcaaaacctcaagaaacggcaccaaaggtccaccagggaaggaggatcgtcgtgtg
gtgtcagatcaaagtagtggctctgaagatgaccatgtgaggcatactgaccatgatcga
agaaaagaacgcagacgagaagcagatgtagaccacaaaagagatgatcctgaaagacgg
cgcagtgatggtactcatgatcgccagcgtgattctgaccatcacagaaggcaggacagg
ggccatgaccgaaggcgggaacatgacaggaacagagacagagaccggaaagaaagccat
gaccaaggttggagaggggatcagcacagaagggaggatcacaaacacagccggagagaa
ggtcgtagtgagagctatagagacgagaatagcaggagagatgattacaggaatgaccgg
gatcgcagtcagagggatgagcaaaaagatcatcaaagggatgatcgaagagacgagcga
agaggtgattcaagaagcgaccggaggagagatgaccgaagagatgatcgaaggggcgat
cgaagagatgatgagcaatcgggtgatctcagaactgaacacagtggaaggggcggaagg
gaggaggcggtggggcacaaacgagtacggagaagttcacctgacacagaggctgagcca
ccacggaagaaggatgtcatcactgggcgtactggtggtgcctacataccacctgcacgc
cttcgcatgatgcagcagcagattacagacaagtctagtgtggaataccagcgcattgct
tgggaagctctgaaaaagagcattaacggattggtaaacaaagcaaatgtgggaaacata
gatgtcataatcaaggagctgatgcgggaaaaccttgtccgtggaaggggccttctttgc
cgcacaatcatgactgcccaagcagcatcacccacctttacacatgtttatgcagcaatg
gtggcagtcataaacactaggtttccccagacaggggagcttatactgaaaagactggtg
atccagttccgacggtcattcaggcgaaatgacaaacttacttgcatggcttctgtgcgt
ttcattgcacatcttttgaaccagcaagtggctcatgaagtactggctctggaaatcttg
acactcctccttggaaacccaactgatgactcagtggaagtggccgtggcatttctaaag
gaatgtggcatgaaactgactgagcttacaccaaaaggagttcacgccatatttgaacgc
ttgagaagcattcttcacgaggcaaatttggacaaacgagtgcagtacatgattgaagtt
atgtttgctatacgcaaagatggatttactgcccatcccagtgttgtgaaggagcttgaa
ttggttgaagaagaaagccagtacactcacttactggctttagatgacacattggacgga
gaggatatgctgaatgtattcaagtttgatccagagtttgctgaaaatgaagagagatat
gctgagattgcaaaagatatattgggcagtgatgatgaaggtgatggatcaggaggtgat
gattcggatgatgaggaggaagaggaagatcaagctgaagagaatggtgagataattgac
aacaccgagactaacctggtggctctcaggcggaccatttatttgacaattcagtcaagc
ctcaactttgaggagtgtgctcacaagttgctcaagctggagctgaagcctggacaagtg
agtgaaatgtgccatatgattcttgactgctgtgcccaacagcgcacatatgaaaaattc
tttggactgttggcccagcgtttctgtcagttgaaaaaggagtatgcagagccttttgag
cagatattcttgagttcatatgacaccattcaccgttttgagacaaacaagttgcgcaat
gttgccaagttcttcgcccatcttcttttcacagatgccattccatggaatgttctgtct
catatcaagcttactgaagatgacacaacatcatccagccgtatcttcattaaaatcctg
ttccaagaattatgcgagtacatgggtctaccgaaactgaatgaaagaataaaagacccg
acattgcaagatgcttttgaaggtctgttcccaagagacctgcccaagaatactcgattt
gccattaatttcttcacgtctattggccttgggggacttacagctgacctacgtgagcac
ctcaaatctgctcctaagccagcaccagttacggacgtgattgctgcacctgcagctgca
gcaaagaagaagagcacttcatcaagcagcgattccagtagtggatcaagcagtagtgac
tcgggcagtgaatccagcagttga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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