KEGG   Desulfomonile tiedjei: Desti_4865
Entry
Desti_4865        CDS       T02147                                 
Name
(GenBank) selenocysteine-specific translation elongation factor SelB
  KO
K03833  selenocysteine-specific elongation factor
Organism
dti  Desulfomonile tiedjei
Brite
KEGG Orthology (KO) [BR:dti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:dti03012]
    Desti_4865
Translation factors [BR:dti03012]
 Eukaryotic type
  Elongation factors
   Desti_4865
 Prokaryotic type
   Desti_4865
SSDB
Motif
Pfam: GTP_EFTU WHD_3rd_SelB WHD_2nd_SelB GTP_EFTU_D2 Beta-barrel_SelB SRPRB MMR_HSR1 RsgA_GTPase MnmE_helical
Other DBs
NCBI-ProteinID: AFM27479
UniProt: I4CD38
Position
complement(5619343..5621268)
AA seq 641 aa
MKRVILGTAGHIDHGKTQLVRALTGIDTDRLKEEKQRGISIELGFAFLELGNDIRMGIVD
VPGHEKFVRQMVAGSGGIDIAALIVALDEGVMPQTVEHLDILNLLDVRMGLVVLTKADLV
DEELALLVEEDARDSVKGTFLEKAPFVKVSSKTGEGLDNLREVLTDMATKITEKPVHGLM
RLPVDRVFTLKGHGTIVTGTLISGTMSVGDEIEILPSGLRTTVRSLESHNRQEEKAFPGE
RVAVNLRGLEQAQVHRGEVLTHPGQFKPSYIVDVKLRSLARSPIPLNNRRKVRFHHYTSE
VEARIILPDMDVLEPGHEVLAQLRASEPVVPAAGDRFVVRALSPSITLGGGVVMNPRAAK
LRARSAKTFLELDRGDDVSIIISLVRSAGIMGIGRNELLGLSGFSVKRLDKTLETLRNSR
TIIRFDPTENRMVHKDFFEIVRTRILKRLTAFHAEHPLKEGMSKQEVRSSLPGSEKLIKA
VMDFLVSKAEIADEGNLLRLSSHKVQLNENEKDIKDRLAALIVKAGNAPPLFKEVVAAAK
VDQKQTRNLMSILEKEGRVVRISEDFYFSKDFVDDIKRKLTDFIKREGGITPSQFAEITK
SSRKFNIPLLEYLDRQRFTMRVGDQRVLRGSGSSGEGGKVE
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgaaaagagtaattttaggaaccgccggacatatcgatcacggcaagacacaacttgta
cgcgcgctgaccggaatcgatacggaccgtctgaaagaagagaagcaacgcggcattagc
atagagttgggcttcgcgtttctcgaactcggcaatgatatccggatgggcatcgtggat
gttccgggacacgagaaatttgtccgacagatggtggcgggctcgggcggaattgatatc
gcagcgctgattgtggctctggacgaaggagtaatgccgcagaccgtggagcatctggac
attctgaacctgctggatgttcgtatgggactggttgtgctcacaaaggcggacctggtt
gacgaagaattggctctccttgtggaggaggatgctcgggattcggtaaagggaactttt
ctcgaaaaggctccctttgtcaaagtctcttccaaaaccggcgaggggttggacaacctt
cgcgaagtcctgacggacatggcaaccaagattacggaaaagccggttcacggtctcatg
agattgccggtagacagagtattcaccctgaaggggcacggaacgatagtgaccggcaca
ctgatttccgggaccatgtccgttggcgacgaaatcgagattcttcccagcggcttgaga
acaacggtacgctcgcttgaatcccacaaccgtcaggaggaaaaggcctttcccggagag
cgagtggcagtcaatctccggggattggaacaggcgcaggtgcaccgtggcgaagtcctc
actcatccgggccagttcaagccttcttacattgttgacgtgaaactcaggtctctggcg
cggtcacccattcccttgaataatcgaagaaaagtcagatttcaccattatacgtcggaa
gttgaggcgcgtattattttgcccgatatggatgtccttgagccgggtcacgaagtgctc
gcacaactgcgggcgtcagagccggtggtgcctgctgcaggcgaccggttcgttgtgaga
gcgctctctccgtccattacccttggcggcggggtggtcatgaacccccgtgcggcaaag
ctgcgggcgaggtccgcgaaaacttttctggaactggaccgtggggacgacgtcagcatt
atcatctccctggttcgcagcgcaggcataatgggcatcggacgaaacgagctgctcggc
ctctcgggtttttctgttaaacgtcttgataagacactggaaacgctgcgtaattcaagg
acgataatccgtttcgatcccacagaaaaccgcatggtccacaaggacttttttgaaata
gttcgaactagaattctgaagcgcctgactgcttttcatgccgaacatcccctcaaagaa
ggcatgtcaaagcaggaagtgcgttcgtcattgcccggttcggaaaaactcattaaagct
gttatggattttctcgtttcaaaagctgaaatagcggatgaaggaaatctccttcgcctg
agttctcataaagtccaactcaacgagaatgaaaaggacatcaaagacaggcttgcggcg
ctgatagtaaaggccggcaacgcgcctcctcttttcaaggaagttgtagccgctgcgaaa
gtggaccagaagcaaacgcgcaatcttatgagcatcttggaaaaagaaggtcgagtggtt
cggattagtgaagatttctatttttctaaagatttcgtagacgacatcaaaaggaaactc
actgacttcatcaagcgtgagggcgggatcactccatctcaattcgccgaaataacgaag
tcttcgcgaaaatttaacattccgctcctggagtatttggacaggcagcgattcaccatg
cgagtgggcgatcagcgagtgctgagaggttcgggaagctccggtgaaggcggcaaggtg
gaatag

  All links  
Gene (27)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (37)   

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