KEGG   Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_5574
Entry
ECRM13514_5574    CDS       T03010                                 
Symbol
yjiE
Name
(GenBank) Putative transcriptional regulator LYSR-type
  KO
K21645  LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecoo03000]
    ECRM13514_5574 (yjiE)
Transcription factors [BR:ecoo03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    ECRM13514_5574 (yjiE)
SSDB
Motif
Pfam: LysR_substrate HTH_1
Other DBs
NCBI-ProteinID: AHG12190
Position
complement(5458279..5459190)
AA seq 303 aa
MDDCGAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR
QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII
SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS
DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD
GCGIAWLPEYAIQQEIRSGQLVVLNRDEQVIPIQAYAYRMNTRMNPVAERFWRELRELEI
VLS
NT seq 912 nt   +upstreamnt  +downstreamnt
atggatgactgtggtgcggttttgcataatattgaaaccaaatggctttatgattttctg
accctggaaaaatgccgcaatttttcccaggcggcagtcagtcgtaacgtctcgcaaccg
gcattcagccgccgcatccgcgcgctggaacaggcgattggcgttgaattgtttaaccgc
caggtgacgccgctgcaactctcagaacaagggaaaatcttccattcgcagatccgccat
ctgttgcaacagttagaaagtaaccttgcagagctgcgtggcggcagcgattacgcgcaa
cgtaaaatcaagatagccgctgcacactctctttccctcggtctgttaccgtccattatc
agccagatgccgccgctctttacctgggcaattgaagccattgatgtcgatgaagcggtc
gataaactgcgtgaagggcaaagtgactgtattttttcctttcacgacgaagatttgctg
gaagcgccgtttgaccacattcgcttatttgaatctcaattgttccctgtctgcgccagt
gacgaacacggagaagcactttttaacctcgcgcagccacactttccgttactgaattac
agccgcaactcctacatggggcgattgattaatcgcaccctgacgcgccacagtgagtta
agtttcagcaccttttttgtctcttcgatgagcgagcttttaaagcaggttgccctcgac
ggctgtgggattgcctggctgccggagtatgccatccaacaagaaattcgcagcgggcag
ctcgttgtgctgaatcgggacgaacaggtgatcccgattcaggcctacgcataccggatg
aatacccgcatgaatcccgttgccgaacgcttctggcgtgaactgcgcgagctggagatt
gtgcttagctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (4)   

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