KEGG   Escherichia coli APEC O1 (APEC): APECO1_2863
Entry
APECO1_2863       CDS       T00425                                 
Symbol
selB
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
  KO
K03833  selenocysteine-specific elongation factor
Organism
ecv  Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ecv03012]
    APECO1_2863 (selB)
Translation factors [BR:ecv03012]
 Eukaryotic type
  Elongation factors
   APECO1_2863 (selB)
 Prokaryotic type
   APECO1_2863 (selB)
SSDB
Motif
Pfam: Beta-barrel_SelB GTP_EFTU WHD_2nd_SelB_bact WHD_1st_3rd_SelB WHD_3rd_SelB WHD_2nd_SelB GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase GTP_EFTU_D4 HrcA SRPRB
Other DBs
NCBI-ProteinID: ABJ03069
UniProt: A0A0H2Z457
Position
complement(4054732..4056576)
AA seq 614 aa
MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG
HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA
RVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPEREHASQHSFRLAID
RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETAHAGQRIALN
IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLL
EDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA
RAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ
RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDDALVLLLIEKMRESGDIHSHHGWLHL
PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV
KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG
NDHLLRDALLFPEK
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgattattgcgactgccggacacgttgaccacggcaaaacaaccttgttgcaggcgatt
acgggcgtaaatgccgaccgtctgccggaagaaaaaaagcgcggcatgaccatcgatctc
ggctatgcctactggccgcagccggatggtcgcgtgcctggttttatcgacgtacccggt
catgaaaagtttctttccaacatgctggcgggcgttggtggtattgatcacgcgctgttg
gtggtggcgtgcgatgacggcgtgatggcacagacccgtgagcatctggcgattttgcag
ctgaccggtaacccgatgctgacagtggcgctgaccaaagccgatcgcgtggacgaagcg
cgtgttgatgaggttgaacgccaggtaaaggaggtgctgcgggaatacggttttgctgag
gcaaaactgtttatcaccgcagcaaccgaaggtcggggaattgatgccctgcgcgagcat
ctgcttcagttaccagaacgtgaacacgccagccaacatagtttccgcctcgcgatcgac
cgtgcatttaccgtaaaaggtgccgggctggtcgtcaccggtacggcgttaagcggggaa
gtgaaggtaggcgattcactatggctgactggtgtaaataaaccgatgcgcgtgcgtgcg
ctacatgcgcaaaatcagccaacagaaactgcccatgccgggcagcgtatcgcgcttaac
atcgcgggtgatgcggaaaaagagcagattaaccgtggcgactggctgcttgccgatgtg
ccgccggagccgttcacacgggtgattgtcgagcttcaaacccatacaccgctgacccag
tggcagccgctgcatattcaccacgccgccagccacgttacgggacgcgtttcgctgctg
gaagataaccttgccgagctggtgttcgacacgccgctgtggctggcggataacgatcgc
ttagtgctgcgcgatatctcggcccgcaacacgctggcgggggcgcgtgtggtgatgctt
aacccgccgcgccgcggtaagcgtaagccggaatatctgcaatggctggcgtctcttgca
cgggcgcagagcgatgccgatgcgttatctgttcatctggaacgcggcgcggttaacctt
gcggatttcgcctgggcacggcagctcaacggcgaagggatgcgcgaactgctgcaacag
cctggttatattcaggctggttacagcttgttgaatgcgccagttgccgcccgctggcag
cggaaaattctcgacacattagcgacttatcatgagcaacatcgcgatgaacctggtcct
gggcgcgaacgtctgcgacgtatggcgttgccaatggaagatgacgcgctggtactgttg
ctgattgaaaagatgcgcgaaagcggcgacatccacagccatcacggctggctgcatctg
ccggatcataaagcgggcttcagcgaagagcagcaggccatctggcaaaaagcagagccg
ctgtttggtgacgagccatggtgggtgcgtgacctggcaaaagagacgggaaccgacgag
caggcaatgcgcctgacgctacgccaggcggcgcaacaggggataattactgcgatcgtc
aaagatcgttattaccgtaacgatcggattgtcgaatttgccaatatgatccgcgatctc
gatcaggaatgcggttcaacctgcgcggcggatttccgcgatcgcttaggcgtaggccgc
aagctggcaattcagattctggaatattttgaccgtattggctttacgcgtcgtcgtgga
aatgatcatttattgcgcgacgcattattatttccggaaaaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (15)   

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