KEGG   Entamoeba histolytica: EHI_119290
Entry
EHI_119290        CDS       T00238                                 
Symbol
232.t00012
Name
(RefSeq) recQ family helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ehi  Entamoeba histolytica
Pathway
ehi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EHI_119290 (232.t00012)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehi03019]
    EHI_119290 (232.t00012)
   03400 DNA repair and recombination proteins [BR:ehi03400]
    EHI_119290 (232.t00012)
Enzymes [BR:ehi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EHI_119290 (232.t00012)
Messenger RNA biogenesis [BR:ehi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EHI_119290 (232.t00012)
DNA repair and recombination proteins [BR:ehi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EHI_119290 (232.t00012)
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII TriTu CsgE
Other DBs
NCBI-GeneID: 3404570
NCBI-ProteinID: XP_650264
UniProt: C4M4X8
AA seq 774 aa
MSESDDVQEIDLIVIDDDYCDNFEIEKRRYSVEEEKKENSNQSIANTFNTLHSFGLKKVS
FPETEEKEELQNEINNCSDAECMSNNIISCNTQKIDLNNPSSEHTPLNSKDLLIIEDTKR
SIQKTKTPPKLQSLIDDFIKPKNSFEPQRTKTLELKKTKTISDVFEEMERASSQILLRTD
TLPIKSHSPISKRISSDFFTLMFKKSNTLESQEDNTDATKKTSSLIDLCENDPIIIENIN
EDNPYYQKVFSESDKRLLIEREQELTKQLKEIKVSDETFEQIRKIAFEREEVRIQLKVIT
SRETTQKGNTTIRLKENDKVGRITLWKNHEAKKGFEPFKIEEQIPDVVQSTNIRSYPIWT
NWWGENFHWKERVKEVLHKVFHHETLRLLQYPVINAILAGHNVLALMPTGGGKSLCYQLP
SLFKDGYTLVVSPLISLMQDQVKALNDLGIPAITCNSNNPENIDIFINDIETRKIKIVYV
APELLSCSWKMNEAMKKLYDRGLFSYLVIDEAHCISQWGHDFRQSYVELREFRKTFPSVQ
TILFTATATERVKNDILLSMGLEEAIVFNQTFNRPNLRYETRVKSPKVEVDIAHYIQQHP
NQCGIVFCLSKKDCESLSKFLINYGIRATHYHAGLDAKRRKKVQNDWMNGTFLVVCATVA
FGMGIDKPDVRFVIHQTMPSSIEQYFQESGRAGRDGKPSDCIIYFSMKDIARVEWLKRDM
GKNELTASQQQSINAMVNLCITSECRRKIQLMYFDESFNEEKCTGCDNCERKKK
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgagtgaaagtgatgatgtacaagaaattgatttaatagttattgacgatgattattgt
gataattttgagatagaaaaaagaagatatagtgtagaagaggaaaagaaagaaaattca
aatcagtcaatagcaaacacttttaatactttacattcgtttggtttaaaaaaagtcagt
tttccagaaacagaagaaaaggaagaattacaaaatgaaataaataattgtagtgatgct
gaatgcatgtcaaataatattattagttgtaacacacaaaaaattgatttaaacaaccca
tcatcagaacacactccattaaattcaaaagatcttctcattattgaagatactaagaga
tcaatacaaaaaacaaaaacaccaccaaagttacagtctctaatagacgattttattaaa
ccaaaaaactcatttgaacctcaaagaactaaaacattagaattgaagaagactaaaaca
attagtgatgtgtttgaagagatggaacgtgctagtagtcaaatacttcttcgaacagac
actcttccaataaaatctcattctcctatctctaaaagaatatcttcagatttttttact
ttaatgtttaaaaaaagtaatacattagagtcacaagaagataacactgacgctacaaag
aaaacatcgtctttaatagacttatgtgaaaatgatccaataataattgaaaatataaat
gaagataatccttattatcagaaagtatttagtgaaagtgataagagactgctaattgaa
agagaacaagaacttacaaaacaattaaaagaaattaaagtatcagacgaaacatttgaa
caaataagaaaaattgcatttgaacgagaagaagtaagaatacaattaaaagttataaca
tcaagagaaactactcaaaaaggtaatacaacaattaggctgaaagaaaatgataaagtt
ggaagaattactttgtggaagaatcatgaagcaaaaaaaggatttgaaccatttaaaata
gaggagcaaataccagacgtagttcaatcaactaacattagatcatatcccatatggaca
aattggtggggagaaaattttcattggaaagaaagagtaaaagaagtattacataaagta
tttcatcatgaaacacttcgattacttcaatacccagttatcaatgcaatattagctgga
cataatgttcttgcattaatgcctacgggaggaggaaaatcattatgttatcaattacca
tcattatttaaagatggatatacattagttgtatctcctttaatatctcttatgcaagac
caagtaaaagcattaaatgatttaggaataccagctattacttgtaatagtaataatcca
gaaaatatagatattttcattaatgatattgaaacacgtaaaattaaaattgtttatgtt
gcaccagaacttctttcttgtagttggaagatgaatgaagcaatgaaaaaactatatgac
cgaggattgttttcatatcttgttattgatgaggctcattgtatcagtcaatggggacat
gattttagacaatcatacgttgaattaagagaatttagaaaaacatttccatcagtacaa
acaattctgtttactgccacagcaacagaaagagttaaaaatgatattttattatctatg
ggacttgaagaagctattgtatttaatcaaacatttaatagaccaaatttaagatatgaa
acgagagttaaatcaccaaaggttgaagttgatattgctcattatattcaacaacatcca
aatcaatgtggaattgtattttgtctttctaaaaaagattgtgaaagtttaagtaaattt
cttattaattatggaataagagctactcattatcatgctggactagatgctaaaagaaga
aagaaagttcaaaatgattggatgaatggaacatttttagtagtttgtgctactgttgca
tttggaatggggattgataaaccagatgttcgatttgttattcatcaaactatgccatca
agtattgaacaatattttcaagaatcaggaagagcaggtagagatggaaaaccaagtgat
tgtattatttattttagtatgaaagacattgctagagtagaatggctaaaaagagatatg
ggtaaaaatgaattaacagcatcacaacaacaatccattaatgcaatggttaatttatgt
ataacttctgagtgtagaagaaaaattcaattaatgtattttgatgaaagttttaatgaa
gagaagtgtacaggatgtgataattgtgaaagaaaaaagaaataa

  All links  
Gene (32)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system