KEGG   Enterobacter hormaechei CAV1176: AB284_01120
Entry
AB284_01120       CDS       T04593                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ehm  Enterobacter hormaechei CAV1176
Pathway
ehm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AB284_01120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehm03019]
    AB284_01120
   03400 DNA repair and recombination proteins [BR:ehm03400]
    AB284_01120
Enzymes [BR:ehm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AB284_01120
Messenger RNA biogenesis [BR:ehm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AB284_01120
DNA repair and recombination proteins [BR:ehm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB284_01120
SSDB
Motif
Pfam: RQC Helicase_C DEAD HRDC RecQ_Zn_bind ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ANS15321
UniProt: A0A2J0PUP4
Position
complement(35133..36962)
AA seq 609 aa
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMTGCRTGQIRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRQDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPKQYDGLMDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGEVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq 1830 nt   +upstreamnt  +downstreamnt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcaggaaacc
tttggctaccagcagttccgtcctggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgcctggtggtcatgccgaccggcggcggtaaatcgctctgctatcaggtgccc
gcgctggtgcttaatggcctgacggtcgtggtatcgccccttatttccctgatgaaagac
caggtcgaccagctgcttgccaacggcgtggcggcggcctgcctgaactcgacgcagacc
cgcgagcaacagcaagaggtaatgaccgggtgccgcaccgggcagatccgcctgctgtat
atcgcgccagaacgcctgatgctggacaacttcctcgatcatctggcgcactggaatccg
gtgctgctggcagtggatgaagcgcactgtatctcccagtgggggcacgatttccgcccg
gaatacgccgcgcttggccagcttcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggacgacaccacgcgtcaggacatcgttcgcctgctggggctgaacgac
ccgtatattcaggtcagcagcttcgaccgcccgaacatccgctatatgctgatggagaag
ttcaagccgctggatcagctcttacgctacgtgcaggagcagcgcggaaagtccggcatc
atctactgcaacagccgggcgaaggtggaagacaccgccgcgcgtctgcaaaaccgtggc
tttagcgccgcggcctatcacgccgggctggagaaccatatccgcgccgacgtgcaggag
aaattccagcgcgacgacctgcaaatcgtggtcgcaacggtggcgttcgggatggggatc
aacaagcccaacgtgcgctttgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggaaaccggccgcgccgggcgtgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctcgaggagaaaccgcaggggcagttg
caggatatcgaacggcacaagcttaacgcgatgggggccttcgccgaagcgcaaacctgc
cgccgtctggtgctgctcaactactttggtgaagggcgtcaggcaccgtgcggcaactgc
gatatctgcctcgacccgccgaagcagtacgatggcctgatggacgcgcgcaaagcgctc
tcgactatcggacgcgtgaaccagcgcttcgggatgggctacgtcgttgaagtgctgcgc
ggggctaacaaccagcgtatccgcgatatgggtcacgacaaactgccggtttatggcatc
gggaaagaccagagccacgagcactgggtgagtatcatccgccagctgatccatctcggc
tttgccacgcagaacattgcccagcactctgcgcttcagctgaccgaagcggcgcgaccg
gtcctgcgtggcgaggttgaactgaagctcgccgttccgcgcgttgtcgccctgaagccg
cgcgtgatgcagaaatcctacggcggtaactacgatcgcaagctgttcgccaagctgcgt
aagctgcgtaaagccattgcggatgaagagaacatcccgccatacgtggtgttcaacgac
gcgacgcttatcgagatggccgagcaaatgccgctcagcgccagcgagatgctcagcgtc
aacggcgtcggcacgcgtaagctggagcgctttggtaaagagtttatggcgctcatccgt
tcccacgctgatggtgatgatgaggagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (10)   

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