KEGG   Escherichia coli LF82: LF82_3244
Entry
LF82_3244         CDS       T00854                                 
Symbol
yhbJ
Name
(GenBank) UPF0042 protein yhbJ
  KO
K06958  RNase adapter protein RapZ
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:elf03019]
    LF82_3244 (yhbJ)
Messenger RNA biogenesis [BR:elf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LF82_3244 (yhbJ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_28 nSTAND_NTPase5 AAA_22 AAA_16 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: CAP77665
Position
3390794..3391648
AA seq 284 aa
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNM
PESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKES
DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY
LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP
NT seq 855 nt   +upstreamnt  +downstreamnt
atggtactgatgatcgtcagcggacgttcaggttcaggtaaatctgtcgccctgcgtgcg
ctggaagatatgggtttttactgcgtggataaccttcccgtagtgttgttacccgatctg
gctcgaactctggccgatcgcgagatttctgccgccgtcagcattgatgttcgtaatatg
ccggagtcaccagaaatattcgaacaggcgatgagtaacctacctgacgctttctcaccg
caactactgttcctggatgccgaccgtaataccttaattcgtcgttacagtgacacgcgc
cgactgcatccgctttccagcaaaaacctgtcgctggaaagtgctatcgacaaagaaagc
gatttgctggagcctctgcgttcgcgagcggatctgattgtcgatacctcagaaatgtcc
gttcacgagctggctgaaatgctgcgtacccgtctgctgggtaaacgtgaacgcgaactg
accatggtctttgagtcttttggcttcaaacacggtatccctatcgatgcagattacgtc
tttgacgtgcgcttcttgccgaacccgcactgggatccgaaactgcgtccaatgacaggt
ctggataagcctgtcgccgcgttcctcgaccgccacacagaagtacacaattttatctac
cagacgcgaagctatcttgagctatggttacctatgctggaaaccaacaaccgtagctac
ctgacggtcgccattggttgtaccggcgggaagcaccgttcggtgtatattgcagagcaa
ctggcagactacttccgctcgcgcggtaaaaacgtccagtcacgccatcgtacgctggaa
aaacgtaaaccatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system