KEGG   Eublepharis macularius (Leopard gecko): 129325240
Entry
129325240         CDS       T09084                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129325240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emc03400]
    129325240
DNA repair and recombination proteins [BR:emc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     129325240
SSDB
Motif
Pfam: Tyr-DNA_phospho DUF1972
Other DBs
NCBI-GeneID: 129325240
NCBI-ProteinID: XP_054828843
UniProt: A0AA97KT25
Position
2:complement(34055678..34109267)
AA seq 599 aa
MSQKSEHGKWTVSSSDESVDEQDNCDKPSTSLVQRAGRDRAGEPPYPCSEARKAAQKRKS
SPLEFRDGNFSSEVQPAPKRLSQEGSGWCLSSSDEEGDCQVQAKRGDAAATSARLEGDCA
KEAVKDELPLNHSSTGPSVRVQDTWDLLNGGNPFRFFLTKVKGIKSKYNSGALHIKDILS
PLFGTLVSSAQFNYCIDVEWLIHQYPKEFRDKPLLIIHGEKRESKADLHEQAHPYTNVRL
CQAKLDIAFGTHHTKMMLLCYEEGLRVVIHTSNLIEDDWYQKTQGIWLSPLYPKLPPGAP
GSAGESRTNFKSDLISYLMSYKSLALNEWIEVIKQHDLSETRVYLLGSTPGRFQNTEKEK
WGHLRLRKLLKDHATQVTDEDSWPVIGQFSSIGSLGADRSKWLCSEFRQSLVTLGNSAKS
PTDQEVPIHLIYPTVDNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAKASGRNH
AMPHIKTYMRVSPDFQKIAWFIVTSANLSKAAWGAFEKNGAQLMIRSYELGVLFLPSEFG
LDTGFFQVKENLLSDEPASSFPVPYDLPPEKYESKDRPWIWNIPYTKAPDTHGNMWVPK
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgtcccagaaaagcgagcatgggaaatggacggtgtccagtagcgatgagagtgtcgac
gagcaagataattgtgacaaaccttcgacttctttggtgcagcgggctgggcgagacaga
gctggggagccgccttacccgtgttcggaggccaggaaggctgcccagaagaggaagtct
tcccctctggagtttcgtgatgggaatttttcgtcggaggtgcagccagccccaaagaga
ctctctcaagaaggttcaggatggtgcctttcgagtagcgacgaagagggcgattgccaa
gtccaagcaaagagaggagatgcagctgccaccagtgccagactggaaggggactgtgct
aaggaggcagtgaaggatgaacttccactaaaccacagttctacaggcccatcagtcaga
gtgcaggacacttgggatctgttgaatggggggaatcctttcagatttttccttaccaaa
gtaaaaggaattaagtccaaatacaactctggcgcccttcacataaaagatattttgtct
cccctttttgggactcttgtgtcatctgctcagtttaactattgtatagatgtggaatgg
cttatccatcagtatccaaaggagttcagggacaaacctttattaatcattcacggagag
aaacgagaatctaaggctgatctgcatgaacaagcacacccctatacaaatgttcgtttg
tgccaggctaagttggatattgcctttggaacccaccacacaaaaatgatgttgttgtgc
tatgaggaaggcctccgtgtggtgatacatacatccaatcttattgaagatgactggtac
cagaaaacacaaggcatatggctaagccctttatatccaaagctaccccctggagctcct
gggtctgctggtgaatcccgtaccaattttaagtctgatctgatcagctacttgatgtct
tacaaatccttggctctcaatgaatggattgaagtaatcaagcaacatgatctttcagag
acaagagtatatcttcttgggtccactcctggccgattccaaaacactgagaaagagaaa
tggggtcatctcagactaagaaagcttttaaaagatcatgcaacacaagtaactgatgaa
gattcttggccagtaataggacagttctcaagtattggatccctgggagctgaccggtcc
aaatggctgtgctcagagtttagacaaagtttggtcactctgggaaacagtgcgaagtct
ccaacagatcaggaggttcccattcatctgatatatcccactgtagacaatgtgagacaa
agtttggaaggttacccagctggaggctctcttccatacagtatacagactgcacagaaa
cagctctggctgcactcttacttccacaaatggtcagctaaagcttcaggtcgtaaccat
gccatgcctcacattaagacttacatgagagtgtctccagacttccaaaagattgcatgg
tttatagttacaagtgccaatctttccaaggctgcttggggagcatttgaaaaaaatggt
gcccagctgatgatccgatcgtatgagctaggagtcctcttcttgccttcagagtttggc
ttggatacaggctttttccaagtaaaggagaacctgctttctgatgagccagcatcatcg
tttcctgtaccttatgatttacctccagagaagtatgaaagcaaagatcgtccatggatt
tggaacattccttatactaaagcaccagacacacatggaaatatgtgggttcctaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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