KEGG   Egibacter rhizosphaerae: ER308_13490
Entry
ER308_13490       CDS       T05860                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
erz  Egibacter rhizosphaerae
Pathway
erz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:erz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ER308_13490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:erz03021]
    ER308_13490
   03400 DNA repair and recombination proteins [BR:erz03400]
    ER308_13490
Enzymes [BR:erz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ER308_13490
Transcription machinery [BR:erz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ER308_13490
DNA repair and recombination proteins [BR:erz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ER308_13490
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L SAM_EPH
Other DBs
NCBI-ProteinID: QBI20475
UniProt: A0A411YGP5
Position
2873991..2874941
AA seq 316 aa
MLTVQRPGITEEPLVEGVRSVFAIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRIEGV
LHEFSSIDGVKEDVTDIILNVKDLVLRCHSEEPVEIFLGGEGPGEITADFITAPSEVEIL
NRDHHIATLNRKGRVEMYLTVEQGRGYVSAERNKRPDQPIGVIPVDSIYSPVRRVTYRVE
ATRVEQMTNYDRLLLDVETDGSVSPPETLASAGSTLQDLFGLFSGFEESGPGGLSIGADT
AAAGPQSPNLMLPIEDLDLSVRSYNCLKREGVATVGELVQKSEQDLLDIRNFGQKSIEEV
KQKLAEMGLSLSDYGG
NT seq 951 nt   +upstreamnt  +downstreamnt
gtgctgaccgttcagcgacccggtatcaccgaggaacccctcgtcgagggcgtgcgcagc
gtgttcgcgatcgaacctctcgagccaggcttcggctacacgctcggcaacagcctgcgc
cgcaccctgctgtcgtccatcccgggcgccgcggtgacgagcgtgcgcatcgagggggtc
ttgcacgagttcagctcgatcgacggcgtcaaggaggatgtcaccgacatcatcctgaac
gtcaaggatctcgtgctgcgctgccactccgaggagccggtcgagatcttcctcgggggt
gagggtcccggcgagatcaccgcggacttcatcaccgcgccgagcgaggtcgagatcctc
aaccgcgatcatcacatcgcgacgctcaaccgcaagggacgcgtcgagatgtacctgacc
gtcgagcagggccgcggctacgtgtcggcagagcgcaacaagcgccccgaccagccgatc
ggcgtgatccctgtcgactcgatctactcgccggtgcgccgcgtgacttaccgtgtggaa
gccacccgtgtcgagcagatgaccaactacgaccggctgctgctcgacgtggagaccgac
ggctcggtcagtcccccggagaccctcgcgtcggccggatcgacgctgcaggacctcttc
gggctcttcagcgggttcgaggagtcgggccccggcggcctgtccatcggcgccgacacc
gctgctgccggaccccagtcccccaacctcatgctgccgatcgaggacctggacctgtcg
gtgcgcagctacaactgcctgaagcgcgagggcgtcgcgaccgtcggtgagctggtccag
aagagcgagcaggacctgctcgacatccgcaacttcgggcagaagtccatcgaggaggtc
aagcagaagctggccgagatggggctctcgctctccgactacggcggctag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

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