KEGG T10355: HNY42

Exiguobacterium sp. Helios: HNY42_01305

Entry

HNY42_01305       CDS       T10355

Symbol

gyrB

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

exh Exiguobacterium sp. Helios

Brite

KEGG Orthology (KO) [BR:exh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:exh03032]
    HNY42_01305 (gyrB)
   03400 DNA repair and recombination proteins [BR:exh03400]
    HNY42_01305 (gyrB)
Enzymes [BR:exh01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HNY42_01305 (gyrB)
DNA replication proteins [BR:exh03032]
Prokaryotic type
  DNA Topoisomerases
   HNY42_01305 (gyrB)
DNA repair and recombination proteins [BR:exh03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HNY42_01305 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Toprim_4

Other DBs

NCBI-ProteinID:

QNR19676

Position

251533..253464

AA seq 643 aa
MSNHEDMELEQGYGADQIQVLEGLEAVRKRPGMYIGSTASKGLHHLVWEIVDNSIDEALA
GYCDTIKVTIEPGNSILVEDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSG
GLHGVGASVVNALSTKLEVFVKRNEKLYYQAYHRGVPAADLEIIGTSEETGTMIRFFPDD
EIFQETLEYDYDLLATRLRELAFLNKGLTIEITDDRADEPITRSFHYEGGIKSYVEHLNR
SKEVVHEEPVYVHGNRDGIEVEVALQYNDGFAANIYSFTNNIPTHEGGTHETGFKTALTR
VINDYAKKFGLMKEADGTLSGEDVREGMTAIVSIKHPNPQFEGQTKTKLGNSDARTATDT
LFSSAFEQFMMENPTSARAIVEKGMMASRARMAAKRARELTRRKGVLEVSSLPGKLADCS
SRDATISEIYIVEGDSAGGSAKSGRDRHFQAILPIRGKILNVEKARLDKILGSNEIRTII
TALGTSIGSEFNIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRPLVEHGYVYIAQP
PLYGIKQGKNITYVHNERELNEALAALPENARYDIQRYKGLGEMDPEQLWETTMDPSGRQ
MLRVELQDAIEADEVFDILMGDQVEPRRDFIQSHAHYVKNLDI

NT seq 1932 nt +upstreamnt +downstreamnt
atgagtaatcatgaagatatggaattagaacaagggtacggtgccgatcagattcaggtg
cttgaaggtctagaagccgttcggaaacgtccgggtatgtatatcggatcgactgcatcg
aaggggcttcaccatttagtatgggaaatcgtcgataactcgatcgatgaagcacttgca
gggtattgcgatacgatcaaagttacgattgaaccgggtaattcgattctggttgaagat
aacggacggggaatcccggtcgatatccaggaaaaaatgggacgtccggcagtcgaagtc
atcctgacagtccttcacgccggcggtaaattcggcggcggcggatacaaagtatccggt
ggtcttcacggtgttggggcatctgtcgttaacgcactctcgacgaagcttgaagttttc
gtcaaacggaatgaaaaactgtattaccaggcgtatcaccgcggtgtacctgctgcggat
ttagagattatcggtacgtcggaagaaaccgggacgatgatccgtttcttcccggatgat
gaaatcttccaggaaacactcgaatacgattatgatctgcttgcgacacgacttcgtgag
ctggcattcttaaataaaggactgacgattgagattacggatgatcgtgcggacgaaccg
attacgcgcagtttccattacgaaggcggaatcaagtcgtacgtcgagcatttaaaccgt
tcgaaagaagtcgtccacgaagaaccggtgtatgttcacggtaaccgggacgggattgaa
gtcgaagtggcattgcaatataacgatggttttgcagccaacatctactcgttcacgaac
aatatcccgacacatgaaggtggaacacacgaaaccggttttaaaacggctttgacacgt
gtcatcaatgactatgcgaaaaaattcggtctgatgaaagaggcggacggtacgttgtcc
ggggaagatgtgcgtgaagggatgacagcgatcgtctcgatcaaacacccgaatccacag
ttcgaaggacagacgaaaacgaaactcgggaactcggatgcacggacggcaacggatacg
ttgttctcgtccgcctttgaacagttcatgatggagaacccgacaagtgcccgtgccatc
gttgaaaaaggaatgatggcgtcccgtgcccggatggctgcgaaacgtgcccgtgaatta
acacgacgcaaaggggtccttgaagtcagttcacttccagggaaacttgccgactgttca
tcacgtgatgcgacgatttccgaaatctacatcgttgagggtgactcggcgggtggttca
gcgaaatctggacgtgatcgtcatttccaagccatcttaccgattcgaggtaaaatcttg
aacgtcgaaaaagcacgcctggataagattctcggcagtaacgaaatccggacgatcatt
acggcgctcggaacaagtatcggttctgaattcaatatcgaaaaagcccggtatcacaaa
gtcatcatcatgaccgatgccgacgtcgatggtgcccacatccggacactgttattgaca
ttcttctaccgttacatgcgtccgcttgtcgagcacggttatgtctatattgcgcaaccg
ccgctttacggaatcaaacaaggcaagaacatcacgtacgttcacaacgaacgtgagttg
aacgaagcattagcagcacttccggaaaacgcacgatacgacattcagcgttataaaggt
ctcggtgagatggatccggagcaactgtgggaaaccacgatggatccgagtggtcgtcaa
atgctgcgtgtcgaattacaggacgcgatcgaagcagatgaggtctttgacattttgatg
ggagaccaggtagaaccacgtcgtgactttatccagtcgcacgcccactatgtgaagaac
ttggatatttaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (7)   

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