KEGG   Exiguobacterium sp. MH3: U719_12020
Entry
U719_12020        CDS       T02903                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
exm  Exiguobacterium sp. MH3
Pathway
exm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:exm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    U719_12020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:exm03400]
    U719_12020
DNA repair and recombination proteins [BR:exm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     U719_12020
SSDB
Motif
Pfam: UvrC_RNaseH_dom UvrC_RNaseH UVR GIY-YIG HHH_5 HHH_2 HHH GIY_YIG_2 5_3_exonuc
Other DBs
NCBI-GeneID: 17606731
NCBI-ProteinID: AHA30378
Position
complement(2219364..2221148)
AA seq 594 aa
MGHQEHIKAKLSLLPDEPGCYLHKNEFGEVIYVGKAKNLKNRVRSYFTGAHDIKTERLVA
EVRDFEYIITASELEALLLEMTLIKKHDPKYNIMLKDDKSYPYLKITNETYPRLITTRKL
KKDGGHYFGPYPNAYAANETKRLLDRLYPLRKCQPMPKKLCLYYHIGQCLGPCEIPNLES
EQKALVSEIRRFLSGDTKELVESLKHKMAEAAETMEFERAGELRDQVRAIESIMNKQNMI
TADLTSRDVFGIHVDKGWMCVQVFFLRGGKMIERDVSLFPIYGTPAEELESFIVQFYEKN
IKPSEVYVPPLVNQLLLKEALSIKIHVPVRGSKRKLLDLATKNAENAISERFELLAKDEK
RTVQAVEELADAIDVHPLSRIEIIDNANIQGADAVSALVVFEDGKPLKKEYRKFKIRTVQ
GPDDYESMREIVRRRYRRLLLEGARLPDLVLIDGGVGQLNAALEVIQDELGLSLPVGSLK
KDDKHRTSQLLFGEGAQLIELSPRSSAFYLLQRMQDEVHRFAITFHRSLRSKGMTRSLLD
EIPGVGPKRRQQLIRHFGSMRSLRRATIEQLAEAGLPVKLAETVAEYLSQANEE
NT seq 1785 nt   +upstreamnt  +downstreamnt
ttgggacatcaagaacatatcaaagcgaaactatcccttttgccggatgagccgggatgt
tatctacacaaaaacgaattcggcgaagtcatctatgtcggaaaagcaaaaaatctcaaa
aaccgagtccgctcttatttcacgggagcacatgatattaagacggaacgtctcgtcgcg
gaagtccgtgatttcgaatacatcatcacagccagtgaactcgaagcgttgctgcttgag
atgacactaattaagaaacatgatccgaaatacaatatcatgctgaaggatgataaatct
tacccgtacttgaaaattacgaatgagacctatccacgattgattacgacacgtaagtta
aaaaaggacggcggtcattacttcggtccgtatccgaatgcgtatgcagcgaacgaaaca
aaacgtctgttagatcgtttatatccgttacgtaaatgtcagccgatgccgaagaaactc
tgtctgtattatcatattggacaatgtctcggcccatgtgaaatcccgaatcttgaatcg
gaacaaaaagcactcgtatcggaaatccgacggttcttgtcgggcgacacgaaggaactc
gttgaaagcttgaagcacaagatggcggaagcagccgagacgatggaattcgaacgtgcc
ggagaattgcgcgaccaagtgcgagcgattgaatcgatcatgaacaaacagaatatgatt
acagcagatttgacgtcgcgtgatgtattcgggattcatgtcgataaaggctggatgtgt
gtccaagtgttcttcctccgtggaggaaagatgatcgagcgcgatgtctcgctcttcccg
atctatggtacgccggcagaagagctcgagagcttcatcgtccagttctacgaaaagaac
atcaagccaagtgaagtctatgtaccgccactcgtcaatcagttgttactcaaagaggcg
ctatcgattaaaattcacgttccggtccgaggatcaaaacggaaattacttgatttagcg
acgaagaatgctgaaaatgcgatctcggaacgcttcgagttgttagcgaaagacgagaaa
cggaccgttcaagcagtcgaagaactcgccgatgcgattgacgttcatccattgtcccgg
atcgagatcatcgataatgcgaacattcaaggagcagacgccgtttcggcactcgtcgtc
tttgaagacggtaagccacttaaaaaggaataccgaaaattcaagattcgaacagtccaa
ggaccggacgactatgaatcgatgcgagaaatcgtgcgtcggcgttatcgacgattgtta
cttgaaggagcgcgccttccggacctcgtcctgattgacggaggagttggacagttgaat
gctgctttagaagtcattcaagatgaactcggcttatcccttccagtcgggtcattaaaa
aaggatgacaaacaccgaacgagtcaattgttgtttggagaaggagcacagttaattgaa
ctaagtccgcgttcgagtgcgttttatttgctccaacgcatgcaagatgaagtccaccgg
tttgcaatcacgttccaccgctcgctccgctcgaaagggatgacccgttccttgctcgac
gagattccaggagttggaccgaaacgacgccagcagttgattcgtcatttcggatcgatg
cgcagcttgcgacgcgcaacgatcgaacagttggcggaagcaggattacctgtcaagtta
gcggaaaccgtcgctgaatatttaagtcaagcgaatgaagaatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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