KEGG   Frankia alni: FRAAL5200
Entry
FRAAL5200         CDS       T00384                                 
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase
  KO
K03652  DNA-3-methyladenine glycosylase [EC:3.2.2.21]
Organism
fal  Frankia alni
Pathway
fal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:fal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FRAAL5200 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fal03400]
    FRAAL5200 (alkA)
Enzymes [BR:fal01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     FRAAL5200 (alkA)
DNA repair and recombination proteins [BR:fal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FRAAL5200 (alkA)
 Prokaryotic type
     FRAAL5200 (alkA)
SSDB
Motif
Pfam: Pur_DNA_glyco
Other DBs
NCBI-ProteinID: CAJ63833
UniProt: Q0RFB4
Position
complement(5635325..5636065)
AA seq 246 aa
MAGPAPYPAGFFDRPVLAVAPDLLGATVRHGPVAVRITEVEAYGGLGDPASHAFRGPTPR
AAVMFGPPGRAYVYLSYGVHWCLNIVCGPVGEGSAVLLRAGEVVVGLEAAQARWPTLAVR
DLARGPGRLGRVLGVTASLTGTPVTGGGPLVVRPPTSEVAGLGNGPLVGRVSAAGVVPAA
GVGPAAGAIPAGGAGAAGDGARSGAPGQRIARGPRVGISAAAERPWRFWLAGEPSVSTAR
PGRRRR
NT seq 741 nt   +upstreamnt  +downstreamnt
gtggccggcccggcgccgtacccggcgggcttcttcgaccggcccgtgctggccgtggca
ccggatctgctcggtgcgacggtccggcacgggccggtcgccgttcggatcacggaggtc
gaggcctacggcggcctgggcgatcccgcctcccacgccttccgcgggccgaccccgcgg
gccgcggtgatgttcgggccgccgggccgggcctacgtgtacctcagctatggcgtccac
tggtgcctcaacatcgtctgcggaccggtgggggaggggtcggccgtgctgctgcgggcc
ggtgaggtcgtcgtcggtctggaggcggcgcaggcccgctggcccacgctcgccgtccgg
gatctggcccgaggacccggtcgactcggacgggtcctcggcgtcaccgcatcgctgacc
ggaaccccggtgacgggcggcggacctcttgtcgtccgcccgccgacatccgaggtcgcc
gggctcggcaatggaccgctcgtcggccgtgtgtcggccgcaggcgttgtaccggccgca
ggcgttggaccggcagcgggcgcgataccggcagggggcgccggagcggcaggggatggg
gcgaggtcgggggcgcccggccaacggatcgcccgtggcccacgagtggggatcagcgcc
gctgccgagcgtccgtggcgcttctggctggcgggcgagccatcggtcagcaccgcgcgg
ccgggccgtcgccgcaggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

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