KEGG   Fragilariopsis cylindrus: FRACYDRAFT_157568
Entry
FRACYDRAFT_157568 CDS       T04784                                 
Name
(GenBank) PAP_central-domain-containing protein
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    FRACYDRAFT_157568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_157568
Enzymes [BR:fcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     FRACYDRAFT_157568
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     FRACYDRAFT_157568
SSDB
Motif
Pfam: PAP_central PAP_NTPase PAP_RNA-bind NTP_transf_2 MTPAP-like_central Polbeta
Other DBs
NCBI-ProteinID: OEU12321
JGI: 157568
UniProt: A0A1E7F293
Position
Unknown
AA seq 318 aa
LITFGSYRLGAYRPDADVDLLALCPPSCTRDDFFTRLVSLMEEEPSICDIHPIASAYTPV
LKFTINSINFDMLFGRVYGDTNIDKLFPIEDSFLMGMDDSEVRSANGVRVTQYIMNCVPN
QDRFRLVLCAVKEWASAHGIYSNVLGFLGGVNWAIMVAHVCRQYPNYGPSSLLRTFFQTY
ATWRWPNPVQLVAPSSTETTMTNAPSMIGGGMKPWDPQTNPRDAHHVMPIITPVFPRMNS
AYNVGISQQRRIQEELTRAAFITQDEFNWKSLYNRSDFFNRHANFLQITIRAGNNPDEFT
KWLRLCESRLRILVCALE
NT seq 954 nt   +upstreamnt  +downstreamnt
cttattacattcggtagttatcgattgggtgcataccggccggatgccgatgttgattta
cttgccttatgtccaccctcctgcactcgtgatgatttctttacgagacttgtgtcgtta
atggaagaggaaccatccatctgtgatatccatccaattgcatccgcttacactcccgta
ctcaaatttacaattaattcgatcaactttgatatgttatttggacgtgtctacggagat
acaaatattgataaactatttcctatcgaagattcatttctcatggggatggatgattct
gaagttcgtagcgctaatggggtacgtgtgacgcaatacataatgaattgcgttcccaat
caggatcgattccggcttgtactttgtgctgtcaaggaatgggcaagcgcgcacgggata
tattcgaacgtattaggctttttgggtggtgttaattgggcaatcatggtcgcacatgta
tgtagacaatatcctaactacggtccatcatcattgttacgaaccttctttcaaacttat
gctacctggcgttggccgaacccagtccagctagtcgcaccatcatcaacagagacaact
atgactaatgcaccatcgatgatcggaggaggaatgaaaccctgggatcctcaaacgaat
cctcgagatgctcaccacgtgatgccaatcatcaccccagtctttccaagaatgaactcg
gcctacaacgtcggaatttcgcaacaacgtcgtattcaagaggaattaacccgagccgcc
ttcattactcaagacgaatttaactggaaatcattgtacaatcgcagcgactttttcaat
agacacgccaattttttacagattactatccgggccggtaacaaccctgacgagtttacg
aaatggttgcgactttgcgagtcgcgattgcggattctcgtttgtgcccttgaa

  All links  
Gene (42)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system