KEGG T08888: LQ772

Frateuria edaphi: LQ772_00125

Entry

LQ772_00125       CDS       T08888

Symbol

rsmB

Name

(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

fed Frateuria edaphi

Brite

KEGG Orthology (KO) [BR:fed00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fed03009]
    LQ772_00125 (rsmB)
Enzymes [BR:fed01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     LQ772_00125 (rsmB)
Ribosome biogenesis [BR:fed03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LQ772_00125 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB RsmF-B_ferredox Methyltransf_31 Methyltransf_25 Methyltransf_37 FtsJ Cons_hypoth95

Other DBs

NCBI-ProteinID:

UGB45742

Position

complement(23007..24302)

AA seq 431 aa
MTDTRALAATALAEIALRGTSLREAMERHAPKLPDPRDRALLMALLSEGARWWLRFDPAL
DRLLAQPLRRKEPQVHALLVLGLVQLEILQLQDYAAVAATVEATRALKRPRLAGLVNAVL
RRWQRERTDLLAALDASPPTRHAHPPWLADAIARDWPIHAETVLAADNIEPPLMLRANRR
VTTREALLERLHLDGQTASAHPWLVDAIMLPHSGDITRLSGFASGEFAVQDGAAQVAADL
LDARPGQRVLDACAAPGGKACHVLERSDLALTALDSDPVRLRRIGQNLDRLGLHATLLAG
DAAAPEVWWDGQPYDRILIDAPCSATGVLRRRPDVRLHRRESDIPALAALQQRILGALWP
LLKPGGKLVYATCSLLRAENEAAVQSLLATAADARPLPFALPTGQAAAVGWQILPGDGDL
DGMYYAVLVKQ

NT seq 1296 nt +upstreamnt +downstreamnt
atgaccgacacccgcgccctcgccgccaccgcgctggcggaaatcgccctgcgcggcacc
tcgctgcgcgaggcgatggagcgccacgcgccgaaactccccgatccacgcgaccgcgcc
ctgctgatggccctgctcagcgaaggcgcgcgctggtggcttcgcttcgatcccgcgctc
gaccgcctgctggcccagccgctgcgccgcaaggagccgcaggtacacgcgctgctggtg
ctcgggctggtgcagctggagatcctccagttgcaggattacgccgcggtggccgccacc
gtcgaggccacccgcgcgctcaagcgcccgcgcctggccgggctggtcaacgccgtgctg
cgccgctggcaacgcgagcgcaccgacctgctggccgcgctcgacgcctcgccgccgacc
cgccacgcgcatccgccctggctggccgacgccatcgcccgcgattggcccatccacgcc
gagacggtcttggcagccgacaacatcgaacctccgctgatgctgcgcgccaaccgtcgg
gtcaccacccgcgaggcgctgctcgaacggttgcacctggacggccagaccgcgtcggcg
cacccatggctggtcgatgccattatgctcccccacagtggggacatcacccggctttcc
ggcttcgcttcaggcgaattcgcggtacaggacggcgccgcccaggttgccgccgacctc
ctcgacgcccgccccggccagcgcgtgctcgatgcctgcgccgcgcccggcggcaaggcc
tgccacgtgctcgagcgcagcgacctggcgctgaccgcgctggattcggatccggtccgc
ctgcgccggatcggtcagaacctggaccggctcggcctgcacgccacgctcctggccggc
gatgccgccgcgccggaggtttggtgggacggccagccctacgaccgcatcctcatcgac
gcgccctgctcggctaccggcgtgctgcgccgccggccggacgtacggctgcaccggcgc
gagagcgacatccccgcgctggccgccctgcagcaacgcatcctcggcgcgttgtggcct
ctgctcaagccgggcgggaagctggtctacgcgacctgctcgctgctgcgcgcggaaaac
gaagcggcggtgcagtccctgctcgccaccgccgctgacgcgcgcccactgccgtttgcc
ttgccgacgggccaggccgccgcggtcggctggcagatcctgcccggcgatggcgacctg
gacggcatgtactatgccgtcctcgtaaagcagtaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (9)   

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