KEGG   Fusarium falciforme: NCS54_00056200
Entry
NCS54_00056200    CDS       T09198                                 
Name
(RefSeq) Hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
ffc  Fusarium falciforme
Pathway
ffc03013  Nucleocytoplasmic transport
ffc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ffc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCS54_00056200
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCS54_00056200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ffc03019]
    NCS54_00056200
   03041 Spliceosome [BR:ffc03041]
    NCS54_00056200
Messenger RNA biogenesis [BR:ffc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     NCS54_00056200
Spliceosome [BR:ffc03041]
 Complex C
  Other components
   EJC/TREX
    NCS54_00056200
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NCS54_00056200
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_RFWD3 Beta-prop_NUP159_NUP214 Ras
Other DBs
NCBI-GeneID: 77786511
NCBI-ProteinID: XP_053002187
Position
1:complement(join(2135156..2135319,2135389..2135433,2135490..2135856,2135909..2136147,2136213..2136286,2136357..2136478))
AA seq 336 aa
MAPVLRARQSLSKDKFSSYFGNLRSQPYNDPNSSRGASANSLRCIAWNPLGTLVATGSSE
RVLRVWNPEKPHVKFSTELKGHSASIEKVAFNPTKDAELCSVSSDGVVKFWDVRTKACFN
EVKGLGDAFTLVWAPDGQTLLVGNKADTIYVLSPTQATPISSHQQHVQTNQIAFCWSGEK
IFATTAEGRIRVLSYPGFEPILHTNHGDESEEFQLNGHTSSCLTAELQPTGRYLATGGSD
STIALWDTTDWICQRTITRMVGPVRSLSFTFDGSFVVGGSDEGSGLEISHVETGEHVHTF
KTAGACPVVAWAPTRYCLAYSDLGILRIVGVDVDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcgcctgtcctccgggccagacagagtctgtccaaggacaagttttccagttacttt
ggtaacctccggagtcagccatacaacgacccgaacagctcgcgaggcgcgagtgcaaac
agtctacggtgtatcgcgtggaatccgctcggaacgctggtggccacagggtcgtcagag
agggtcctgagagtgtggaaccctgagaagccccatgtcaagttctcaacagagctcaaa
ggccactcggcctctatcgaaaaggttgctttcaacccgaccaaggatgcagagctgtgc
agcgtgagcagcgacggtgtggtcaagttctgggatgtgcggacaaaggcgtgcttcaac
gaagtaaagggtcttggagatgcattcacgctcgtttgggctcctgacggacagacgctt
ctagttggaaacaaggctgataccatttatgtcttgtctcctactcaagctacgcccatc
agctcccaccagcaacatgtgcaaaccaaccagatcgccttctgctggagcggtgagaag
atattcgcgacgacagcagagggacgtatccgagtcctctcgtatccaggtttcgagcct
attctccataccaaccatggagatgagtctgaggaattccaactcaatgggcacacgtcg
tcatgcttgacggctgagttgcagccaacaggacggtatctcgccacgggtggctcggat
tcgaccattgcgctgtgggatacgacggattggatctgtcagaggactatcacgaggatg
gttgggccagttcgaagcctcagtttcacgtttgatggcagcttcgtggtgggaggaagt
gacgaaggttcgggcctcgagatctctcacgttgaaactggggagcacgttcacactttc
aagacggcaggggcttgccctgtggtggcttgggcaccgacgcgatattgccttgcttac
agcgatctggggattctccgaattgtgggggttgacgttgacaggaaataa

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