KEGG   Fusobacterium animalis 7_1: FSDG_00871
Entry
FSDG_00871        CDS       T03612                                 
Name
(GenBank) UPF0042 nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
fne  Fusobacterium animalis 7_1
Brite
KEGG Orthology (KO) [BR:fne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fne03019]
    FSDG_00871
Messenger RNA biogenesis [BR:fne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FSDG_00871
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_22 AAA_18 Zeta_toxin ABC_tran AAA_14 SLFN-g3_helicase AAA_23 AAA_33 Ins_allergen_rp AAA_30 AAA_28 T2SSE Ribosomal_L31e nSTAND3 AAA_21 AAA_24 RsgA_GTPase cobW Phosphoesterase
Other DBs
NCBI-ProteinID: EEO42312
UniProt: A0A140PSI3
Position
727857..728729
AA seq 290 aa
MKTKHIIIVTGLSGAGKTTALNILEDMNYYTIDNLPLGLEKSLLDTEIEKLAVGIDIRTF
KNTKDFFKFINYIKETGVKMDIIFLEAHEAIILGRYTLSRRAHPLKEVTLLRSILKEKKI
LFPIKEIADLIIDTTEIKNVELEKRIKKFILAKDKENIDVNINIHIQSFGYKYGIPTDSD
LMFDVRFIPNPYYIEKLKELNGFDEEVKEYVLSQKESEEFYSKLLPLLEFLIPQYIKEGK
KHLTISIGCSGGQHRSVTFVNKLAEDLKNSKVLKHINIYVSHREKELGHW
NT seq 873 nt   +upstreamnt  +downstreamnt
ttgaaaactaaacatatcattatcgtaactggtttgagtggtgcaggaaaaacaactgct
ttaaatattttagaggatatgaactattacactattgataatcttcctttggggcttgaa
aaatctctattggatacagaaatagaaaaattagcagtaggtatagatattagaacattt
aaaaatacaaaagatttctttaaatttattaactatattaaagaaactggtgtaaaaatg
gatattattttcttagaagcacatgaagcaattattttaggaagatatactttaagtcgt
agagcacaccctttaaaagaagtaacattattaagaagtatattaaaagagaaaaaaata
ctgtttcctataaaagaaatagcggatttaataatagatacaacagagataaaaaatgtt
gagttagaaaaaagaattaaaaaatttatattagcaaaagataaagaaaatatagatgtg
aatataaatatacatattcaatcttttggttataaatatggtattcccactgatagtgat
ttaatgtttgatgtaagatttattcctaatccttattatatagaaaaattaaaagagtta
aatggttttgatgaagaagttaaagaatatgttttatcacaaaaagaaagtgaagaattt
tattctaaattgttgccactccttgaatttttaattccacaatatataaaagaaggaaaa
aagcatttaacaatttcaataggttgtagtggtgggcaacataggtcagtaacctttgtt
aataaattagcagaggacttaaaaaatagtaaagtattaaaacatataaatatttatgta
agtcatagggagaaagaacttggacattggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system