KEGG   Frondihabitans sp. PAMC 28766: AX769_04225
Entry
AX769_04225       CDS       T04281                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
frp  Frondihabitans sp. PAMC 28766
Brite
KEGG Orthology (KO) [BR:frp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:frp03032]
    AX769_04225
   03400 DNA repair and recombination proteins [BR:frp03400]
    AX769_04225
Enzymes [BR:frp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AX769_04225
DNA replication proteins [BR:frp03032]
 Prokaryotic type
  DNA Topoisomerases
   AX769_04225
DNA repair and recombination proteins [BR:frp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AX769_04225
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AMM19495
UniProt: A0A126YZ24
Position
873359..875341
AA seq 660 aa
MSPNSHDGTDHSYEASDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVQEIVDNAVDEALA
GYCDTIHVFMREDGGIRVVDNGRGIPVDMHPIEKRSTVEVVLTVLHAGGKFGGGGYAVSG
GLHGVGSSVVNALSTELDVEVHRQGSVWRQSFTDGVPVAPLAQGEDADDTGTIITFWPNA
EIFETVEFDYETLRNRFQQMAFLNKGLRITLTDERPLPEDAPDGATVQSDDFMYEKGLED
YVAYLNSSKKNDVVHDDIISFEAEDTDRNMALEVAMQWNTSYSESVHTYANVINTHEGGT
HEEGFRAALTTVVNKYAREKGLIKEKEDNLSGEDVREGLTAVISIKLSEPQFEGQTKTKL
GNTEAKSFTQRVAGAQLNDWFDRNPKQAQAIIRKGQSAQAARLAARKARDQTRRKGVLES
NGMPGKLKDCQSKDPALSEIFIVEGDSAGGSAVQGRNPETQAILPLRGKILNVEKARLDR
ALGNNEVQAMIKAFGADIGDDFDPDKARYHKIVLMADADVDGQHITTLLLTLLFRYMRPL
IDLGYVYLAMPPLFKLKWSNAPHEYVYSDEERDALAIAGRAAGKRLPKDNGIQRYKGLGE
MDYKELWETTMDPDTRTLRQVTLDDAVAADSIFNTLMGEDVELRRNFIQQNAKDVRFLDI
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgtcaccgaattcgcacgacggtaccgaccactcctacgaagcaagcgacattcaggtt
ctcgaaggtctcgaggcggtccgcaagcgtcccggcatgtacatcggctcgaccggccct
cgcggtctgcaccacctggtccaggagatcgtcgacaacgccgtcgacgaggcgcttgcc
ggctactgcgacaccatccacgtcttcatgcgtgaagacggcggcatccgcgtggtcgac
aacggtcgtggcatcccggtcgacatgcacccgatcgaaaaacggtcgaccgtcgaggtc
gtgctcaccgtgctccacgccggcggcaagttcggcggcggcggttacgcggtctcgggt
ggtctgcacggcgtcgggtcgtcggtcgtcaacgcgctctcgaccgagctcgacgtcgag
gtgcaccgtcaggggtcggtctggcgccagagcttcaccgacggcgtgcccgtcgccccg
ctcgctcagggtgaggatgccgacgacaccggcaccatcatcaccttctggccgaacgcc
gagatcttcgagaccgtcgagttcgactacgagaccctccgcaatcgcttccagcagatg
gccttcctcaacaagggcctgcgcatcaccctgaccgacgagcgcccgctgcccgaagac
gcgcccgacggcgcaacggtccagtcggacgacttcatgtacgagaagggcctcgaagac
tacgtcgcctacctcaactcgtcgaagaagaacgacgtcgtccacgacgacatcatctcg
ttcgaggccgaagacaccgaccgcaacatggccctcgaggtcgcgatgcaatggaacacc
tcctacagcgagagtgtccacacctacgccaacgtcatcaacacccacgagggcgggacc
cacgaagagggcttccgcgccgctctcaccacggtcgtcaacaagtacgcccgtgagaag
ggcctcatcaaagagaaggaagacaacctctcgggcgaagacgtccgcgagggcctgacg
gcagtcatctcgatcaagctgagcgagccgcagttcgagggccagaccaagacgaagctc
ggcaacaccgaggccaagtcgttcacgcagcgcgtcgcgggcgcccagctaaacgactgg
ttcgaccgcaacccgaaacaggcccaggcgatcatccgcaagggccagtccgctcaggcg
gcccgtctcgccgcccgcaaggcgcgcgaccagacccgccgcaagggcgtcctcgagtcg
aacggcatgccgggcaagctcaaagactgccagtcgaaagacccggcactcagcgagatc
ttcatcgtcgagggcgactcggccggcggctccgccgtccagggccgcaaccccgagact
caggcgatcctgcccctccgcggcaagatcctcaacgtcgagaaggcgcgtctcgaccgc
gccctcggcaacaacgaggtccaggccatgatcaaggcgttcggcgccgacatcggcgac
gacttcgaccccgacaaggctcgctatcacaagatcgtgctgatggccgatgccgacgtc
gacggccagcacatcaccacgctgctgctgaccctgctgttccgctatatgcgccccctg
atcgacctcggctacgtctacctggcgatgccgccgctgttcaagctcaagtggtcgaac
gcgccgcacgaatacgtctatagcgacgaagagcgcgacgccctcgcgatcgcgggtcgt
gcggccggcaagcgcctgccgaaggacaacgggatccagcgttacaagggtctcggcgag
atggattacaaagagctctgggagaccacgatggacccggacacgcgcaccctccggcag
gtcaccctcgacgacgccgtggcggccgactccatcttcaacacgctcatgggcgaagac
gtcgagttgcgccgcaacttcatccagcagaacgccaaagacgttcgcttcctcgacatc
tga

  All links  
Gene (17)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system