KEGG   Gossypium arboreum (tree cotton): 108450597
Entry
108450597         CDS       T05776                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X3
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108450597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108450597
Enzymes [BR:gab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     108450597
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     108450597
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 108450597
NCBI-ProteinID: XP_017603792
Position
7:complement(103293966..103300302)
AA seq 776 aa
METQSPNGSLQKQSLPPKNYGITKPISLAGPSEADIQRNTELEKFLIESGLYESKEEAAK
REEVLGHISEIVKSWVKQLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVG
PSYVNREEDFFIILHDILAEMEEVTELQPVPDAHVPVMRFKFQGISIDLLYASISLLVVP
DDLDISRESVLHNVDEQTVRSLNGCRVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSN
VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPV
WDPRKNPRDRFHHMPIITPAYPCMNSSYNVSLSTLRVMMEQFQFGNRICEEIDLNKAQWS
ALFEPHLFFEAYKNYLQVDIVSADADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYP
NEYVDTSKQFPHCAFFMGLQRKEGVSGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYV
SHVRRRQLPVFVFPDGYRRPRSLRHPSQQTGKTCEDVTRSHSGSTERQIKRKRDDETVDE
KLNKPEKRASISPLRMESVSPDIITSKSGGTSHNSNGQAVKVEHRGTGDLDSLRGQTSLD
VDDSSVVRSVESAEQIGLPFRQELLSPCEVSDFETREACKAGLNQEKTADSTSAFINDPE
IGSSRRILNWKGVGAEVDREVVKACNQTAAVEIAESVFGSSSNAQNLNCKGSVCGADLDS
LLEKGHLNASAVFQNSLSEELKPSISVGKVVNSQDGARSETLQKPVMSRLSLKSTA
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggagactcagagccctaacggatctttgcagaaacaatcactgcctccgaagaattat
ggaatcacgaaaccaatatcactcgcggggcctagtgaggctgatattcagcggaatacg
gaattagagaagtttctgatagagtcggggctttacgagagcaaagaggaggctgcgaaa
agagaggaggttcttggccatatctctgagattgtaaaaagttgggtaaagcaattaact
cgtcaaagaggctacactgatcagatggtggaggaagcaaatgctgtcattttcactttt
ggatcataccgtttaggggtgcatggacctggggctgacatagacactttgtgtgttggg
ccatcttatgtgaaccgagaggaagatttcttcatcattttgcatgatattttggctgag
atggaagaagtcactgaacttcaacctgttccagatgctcatgtcccagtaatgaggttc
aagttccaagggatatctattgatcttctttatgcaagtatatctcttttggtcgttcca
gatgaccttgacatctcacgtgaatccgtgctgcataatgttgatgagcaaactgttcga
agtcttaatgggtgcagggttgctgatcaaatccttaaacttgtcccaaatgtcgagcac
ttccgcatgacacttagatgtttgaagttctgggcaaagaggcgtggagtttattctaat
gttactggattcctaggaggtgtaaattgggctcttctagttgctcgtgtgtgccaactt
tatcccaatgcagtacctagcatgctggtttctcgatttttcagagtgtatactcaatgg
aggtggccaaaccctgttatgttgtgttcaattgaagaggatgaacttggctttccagtc
tgggatccgcgcaagaatcctcgggaccgtttccatcatatgccaataattactcctgca
tatccttgcatgaattccagttacaatgtctctttaagtacacttcgtgttatgatggaa
cagttccaatttggtaatagaatatgtgaggagattgatctaaacaaagctcaatggagt
gctttgtttgagcctcatcttttctttgaggcatacaaaaactatctacaagttgacata
gtttcggcagatgctgatgacttactggcatggaaaggctgggtagagtctcggcttaga
cagctaaccttgaagatagagcgggacacaaatggaatgttgcagtgtcacccttaccca
aacgagtatgttgatacatccaagcagttcccacattgtgcttttttcatgggtttgcag
aggaaagagggagtgagtggtctagaaggtcaacaatttgacatacgtggaacagttgat
gagttcagacaagagataagcatgtacatgtactggaaaccaggaatggatatttatgtt
tctcatgttcgtaggaggcagctcccagtgtttgttttccctgatggatatagacggcct
cgatcattgaggcatccaagccagcagactggaaaaacttgtgaagatgtcacgaggtcc
cactcaggctctacggaaagacaaattaagagaaaacgtgatgatgagacagttgatgaa
aaattgaacaagcctgagaagcgagcctcaattagccccctgagaatggagtcggtttct
ccagatattattacaagcaagtctggtggaacatctcataatagcaatggtcaagcagtt
aaagtagagcatcgaggaactggggatcttgatagcttacgagggcagacttctttagac
gtagatgattcatcagtagttagaagtgtagagtcagctgagcagataggcttaccgttt
aggcaggagttgctttctccatgtgaagtttctgattttgaaacaagagaagcatgcaag
gctggcttgaatcaagagaaaactgcagattcgacatcagctttcatcaatgatcctgaa
attggatcttctaggagaattttgaactggaaaggagtgggtgccgaggtcgatcgagag
gtggtcaaagcatgtaatcaaacagcagcggtagaaattgctgaaagtgtatttgggtca
agttccaatgcgcagaacctcaattgcaagggcagtgtctgcggtgctgatttggattcg
cttctggaaaaaggacacctgaatgctagtgctgttttccaaaacagcttgtctgaagaa
ttaaagccaagtatctcagttggaaaggttgtaaattcacaagatggagctaggtcagaa
actttgcagaagccagtgatgagcaggttgagtttgaagtcaacggcataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (15)   
   RefSeq(pep) (15)   
DNA sequence (20)   
   RefSeq(nuc) (20)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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