KEGG   Gambusia affinis (western mosquitofish): 122839917
Entry
122839917         CDS       T07758                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gaf03041]
    122839917 (cwc22)
Spliceosome [BR:gaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    122839917 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    122839917 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1
Other DBs
NCBI-GeneID: 122839917
NCBI-ProteinID: XP_043987878
Position
LG11:complement(8395719..8413609)
AA seq 994 aa
MDSPVRSENSSPKQTERNGSSDDESSPGAQGPQPTNARERSSKKESSPEGSNKSKNSSAS
SSDGSSSDDDEHQSALVKIRSSVAQLPRARSKESDRSSSRESKRSMEEDGSESKENNRSK
SRERDGLKSKGRERSGSRSSREDRSRSRERRRSRSKSRSRERGRSRSRSRGRERSRSKGR
DRSRSRGRDRSRSRERDRNRDRFDRRRYPRDRYDDRRDDRDRRFDRRANRDEDSERRRRG
RSGSPPADKEPAAGEEPPVKKKKEELDPILTRTGGAYIPPAKLRMMQQQITDKSSLAYQR
MSWEALKKSINGLINKVNVSNIVNIIQELLQENIVRGRGLLARSVLQAQAASPIFTHVYA
SVVAIINSKFPQIGELILKRLILSFRRSYRRNLKQQCLTASKFVAHLINQNVAHEVLCLE
MLTLLLERPTDDSVEVAISFLKDCGLKLTEVSPRGINAIFERLRNVLHESSIDKRVQYMI
EVMFAIRKDGFKDHPVIPEGLDLVDEDDQFTHMLPLDDEYNPEDILNVFKLDPDFLENEE
KYKTIKRDILDEGSSDSGEEGDGSDDEEEEEDENEEAGEDEKVTIFDKTEVNLVAFRRTI
YLAIQSSLDFEECAHKLIKMDFPDTQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKK
EYMESFEAIFAEQYDTIHRLETNKLRNVARLFAHLLYTDSVPWSVLECIRMSEETTTSSS
RIFVKILFQELCAYMGLPKLNQRLKDPTLQTFFEGLFPRDNPRNTRFAINFFTSIGLGGL
TDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSDSSSSDSSSESDSDSSSSSSSSDFD
SKRKKKRRKGRVEEKKKKGKDKKNKEEKVDKRQKGGRSDDDVEKQAKKDRRERERELDER
ARGDARGRRREDRSEEEERQEEEGQRRKADRQRDDDGERHRGREGDRGRDRDSGRGRERE
YEDKREREGDRERDRDRNKENRDRNREREERRRR
NT seq 2985 nt   +upstreamnt  +downstreamnt
atggattctccagtcagaagtgaaaactccagtcctaaacaaacagagagaaatggatct
tcagatgatgagtctagtccaggagcacaggggcctcagccaactaatgcaagggagaga
agctctaagaaggaatcctctccagaaggcagtaacaaatccaagaactcctccgcaagc
agctcagacggcagcagcagtgatgatgatgaacatcaaagtgctctggtgaagattagg
agcagtgtggcacagttaccaagagccaggtccaaagagagtgacagatcctcatctaga
gagagtaaacggtccatggaagaagacggatctgagtccaaagaaaacaaccgatccaaa
tccagagagagagacggattgaagtcaaagggacgtgaaaggtcgggatccagatccagc
cgagaggatagatccagatccagggaacgaagaaggtccaggtccaagtccagatccaga
gaacgtggaagatcacggtctagatcaagaggacgggaaagatccagatctaaggggcga
gacagatccaggtcaagaggacgggatcgttcaagatccagagaaagagaccggaacaga
gaccgcttcgataggagacgctaccctcgagatcgctacgacgaccggcgcgacgacagg
gacagacgttttgatcggcgagccaacagagatgaagattcagagcgccggaggcggggc
cgctctggctcccctccagcagacaaggagccagctgccggcgaagagccgccggtcaaa
aagaaaaaggaggagctggacccgatcctgacgaggaccggcggcgcttacatcccgccg
gccaaactgcgcatgatgcaacagcaaatcacagacaagagcagcctggcctatcagagg
atgagctgggaggctctgaagaagtccatcaacggtctgatcaacaaagtcaacgtgtcc
aacattgtgaacatcatccaggagctgctgcaggaaaacattgtcaggggaaggggcctt
ctggctcggtcagtgctgcaggcccaagcagcttctcccatcttcactcatgtgtacgct
tccgtcgtggccatcatcaactcaaagttcccacagattggcgagctgatccttaaacgc
ctcatcttaagcttcaggaggagctaccgccgcaacctcaagcaacagtgcctgacggcc
tcaaagttcgtggctcatctcatcaaccagaacgtggcccacgaggttttgtgtttggag
atgctcactctgctgctggagcgtccgactgacgacagcgtggaggtggccatctctttc
ctcaaggattgtggactcaaactgaccgaggtctcaccccgtggaatcaatgccatattc
gagcgtctcaggaatgtcctccatgaatcgtccattgacaaaagggtccagtacatgatc
gaggtgatgtttgccatcaggaaggatggtttcaaagatcatcccgtcatccctgaaggc
ctggacctggtggacgaggacgaccagttcacccacatgctgccgctggatgacgagtac
aacccagaggatatcctcaacgtgttcaagttggacccagacttcctagagaacgaggag
aaatacaaaaccatcaagagagatatcctggatgaaggcagcagcgactcaggagaggag
ggagatggcagcgacgatgaagaggaggaggaagatgagaacgaggaagcgggagaagat
gagaaggtcaccatctttgacaagacagaagtcaaccttgtcgctttcagaagaaccatt
tacctcgctattcagtccagcttggactttgaggaatgcgctcacaaactgatcaagatg
gactttcctgacacacaaacaaaagagttgtgtaacatgatcctggactgctgtgcacag
cagaggacctacgagaagttcttcggtctgcttgcagggaggttctgtctgctgaagaag
gagtacatggagagcttcgaggccatatttgctgagcagtacgacacaatccaccgactg
gagaccaacaaactgaggaacgtagcccgactgttcgctcacctgctctacacagactcc
gtgccgtggagtgtgttggagtgtatccgaatgagtgaggagaccacaacgtcatctagc
aggatttttgtgaaaatcctgtttcaggagctctgcgcctacatgggcctcccaaaactc
aaccagcggctcaaagacccaaccctgcaaaccttctttgagggtctttttcctcgtgat
aaccccagaaacactcgctttgccatcaacttcttcacctccattggactgggaggcttg
accgacgagttgagagaacacctgaagaacgcaccaaagatgatcatgactcaaaaccag
gaagtcgaatcgtctgactcctcgtcctcgtcgtcgtcctcgtcagactcttcctcctcc
gattcctccagcgaatcagattctgactcctcatccagcagcagcagctcagattttgac
agcaaacgcaagaagaagaggagaaagggacgcgtggaagagaagaagaagaaaggaaag
gacaagaagaataaagaggagaaagtggacaagaggcaaaaaggaggcaggagcgacgac
gacgtcgagaagcaggcgaagaaggacaggagggagcgcgagcgtgaattggacgagcgc
gcacgcggggacgcccggggacgaaggcgtgaagacaggtcggaggaagaggagcggcag
gaggaggagggccagagacgaaaagcggacagacaaagagatgatgacggtgaaagacac
agaggaagagaaggggacagagggagagacagagacagtgggcgagggagagagagggag
tatgaagacaagagagagagggagggagacagagagagggatagagataggaataaagaa
aacagagacaggaacagagagagggaggagaggaggaggagatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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