KEGG   Gordonia amicalis: IHQ52_19485
Entry
IHQ52_19485       CDS       T08222                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
gami  Gordonia amicalis
Pathway
gami03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    IHQ52_19485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gami03400]
    IHQ52_19485
Enzymes [BR:gami01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     IHQ52_19485
DNA repair and recombination proteins [BR:gami03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     IHQ52_19485
 Prokaryotic type
     IHQ52_19485
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: UKO91152
Position
complement(4240157..4240840)
AA seq 227 aa
MTAPTKPLAEIIDPGWAEALAPVEPIITEMGRFLRNEIAEGRRYLPAGQHILRAFTRPID
DVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPRSLANIYTEYCSDLGYPMPTNGDLTPW
ADNGVLLLNRVLTVAPGEPASHRKKGWEAVTECAIKALVARDEPLVAILWGKDAAGLQEW
LPDVPAIVSAHPSPLSASRGFFGSRPFSRANEELADLGADPVDWRLP
NT seq 684 nt   +upstreamnt  +downstreamnt
gtgaccgcaccgaccaaaccgctcgccgagatcatcgaccccggctgggccgaggccctg
gccccggtcgagccgatcatcaccgagatgggccggttcctgcgcaacgagatcgccgag
ggccgccgctatctgcccgccggacaacacatcctgcgggccttcacccggccgatcgac
gacgtgcgggtgctcatcgtcgggcaggacccgtacccgaccccggggcatgctgtcggc
ctgagcttctccgtggcccccgacgtgcgtccgattccgcggtccttggccaacatctac
accgagtactgttcggatctcgggtatccgatgccgaccaacggagatctcaccccgtgg
gccgacaacggcgtcctgttgctgaaccgggtgctgacggtcgcgccgggggagcccgca
tctcaccgcaagaagggctgggaagcggtcaccgaatgcgcgatcaaggcgcttgtcgcc
cgtgacgaaccgctcgtcgcgatcctgtggggcaaggatgcggccgggcttcaggagtgg
ttgccggacgtcccggccatcgtctcggcacacccgtcgccgctgtcggcgtcgcgcggc
ttcttcggttcgcggccgttcagccgggccaacgaagaactcgccgatctcggcgccgat
ccggtggactggcggctgccctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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