KEGG   Geothrix sp. PMB-07: Q9293_11540
Entry
Q9293_11540       CDS       T09655                                 
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
gep  Geothrix sp. PMB-07
Pathway
gep02020  Two-component system
gep02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gep00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Q9293_11540
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q9293_11540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gep03000]
    Q9293_11540
Transcription factors [BR:gep03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    Q9293_11540
SSDB
Motif
Pfam: cNMP_binding
Other DBs
NCBI-ProteinID: WLT30351
Position
2593735..2594229
AA seq 164 aa
MIDATFLTQSPLFRNLDETERAQILFIGQRRSCQAGEVLFREGDAGDGLYIVVKGSVRIS
KQSATGEEALAVLEPPAFFGEMALIDVSARAADAIANEATELFFIPLQDLRALIEVQHHI
ALKILYALCEVLAQRLRETNERYMSIFTIAQWGGSNPDGPLPVP
NT seq 495 nt   +upstreamnt  +downstreamnt
ttgatcgacgccaccttcctgacccagtctcccctgttcaggaacctggacgagacggag
cgcgcccagatcctcttcatcggccaaaggcgttcctgccaggccggtgaggtgctgttc
cgggaaggggatgcaggcgatggcctctacatcgtggtgaagggctcggtgcgcatctcc
aagcagagcgccacgggcgaggaggccctggccgtgctggaaccgccggcctttttcggc
gagatggccctcatcgatgtctccgcccgggccgcagatgccatcgccaatgaggccacc
gagctgttcttcatcccgctgcaggatctgcgggccctcatcgaagtgcagcaccacatc
gcgctgaagatcctctatgccctatgcgaagtcctcgcccagcgcctgcgcgaaaccaac
gaacgctacatgagcattttcaccatcgcccaatgggggggctccaatcccgacggcccc
cttcccgtaccctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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