KEGG   Gallus gallus (chicken): 770488
Entry
770488            CDS       T01006                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
gga  Gallus gallus (chicken)
Pathway
gga04010  MAPK signaling pathway
gga04020  Calcium signaling pathway
gga04510  Focal adhesion
gga04518  Integrin signaling
gga04519  Cadherin signaling
gga04540  Gap junction
gga04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:gga00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    770488 (PDGFRB)
   04020 Calcium signaling pathway
    770488 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    770488 (PDGFRB)
   04519 Cadherin signaling
    770488 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    770488 (PDGFRB)
   04540 Gap junction
    770488 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    770488 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:gga01001]
    770488 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:gga04090]
    770488 (PDGFRB)
Enzymes [BR:gga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     770488 (PDGFRB)
Protein kinases [BR:gga01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   770488 (PDGFRB)
CD molecules [BR:gga04090]
 Proteins
  770488 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set C2-set_2 VEGFR-1-like_Ig-like
Other DBs
NCBI-GeneID: 770488
NCBI-ProteinID: XP_025010809
CGNC: 14517
Ensembl: ENSGALG00000030613
UniProt: A0A8V0YR70
Position
13:12851433..12876615
AA seq 1090 aa
MLCPSLKASLQLLILTGLLEVTSGGSGLHIEPEDAELVLRLHSTFSLVCYGDGTLVWERD
GQPLTAVLEHRDGVFISNLTLRNVTGRHTGEYACFYSPDQAPERAERKALYIYVPDPSLV
FLPAITSEEFFIFITGYTEATIPCRVTNPELQVTLYEKKVENPIPATYDPQQGFKGFFED
KTYYCQAIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHDIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIERGFVRFHTHLASTVYAEVHKSHIIQVDVEAYPQPNIVWLKNNKTLTMESSSEF
TITNRNLSETRYQTSLVLVRVKQEEGGYYTIRASNEDDAQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSNIKWCGSQGQPTQLLGNNSAEIGLHTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGSNSQDITLVPNALPFKVVIISVILALLVL
TVISLIILIILWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAELYGNTIKEDHV
QSHLSLSVESDGGYMDMSKDESLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNARLPPSSPTLYTAVHQNGGENDYIIPL
PDPKPDAICDLPQEASVSRASSMLNEANTSSTISCDSPLGPRQDEEPECDLQLGCQELAP
GHHEVEESFL
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgctctgtccctctctgaaggcatctctgcagctcctcatcctcactggtctgctggag
gtaacgtctggaggcagcgggctgcacatcgaacctgaagatgctgagctcgtccttagg
ctccacagcactttctccctcgtgtgctatggggacggcacgctggtctgggagcgggat
ggtcagcctctcactgccgtgctggagcacagggacggggtcttcatcagcaacctcacc
ctcaggaacgtgacaggccgtcacacgggggagtatgcgtgcttctacagccctgaccag
gctccggagcgagcagagaggaaagccctttacatctatgttccagatccctccttagtt
tttctccccgcaatcacttctgaagagttcttcatcttcatcacgggctacacagaggcc
accatcccatgccgtgtgaccaacccagagctgcaggtgaccctctatgaaaagaaagtg
gagaatcccattccagctacttatgacccacaacagggcttcaaaggcttctttgaggac
aagacctactactgccaggcaatcgtggatgaccaagaggtggattcagacaccttctat
gtctaccggatccaggtctcatctgtgaacgtctccatcagcgcagtgcagaccgtagtg
cggcagggagaaaatgttaccctgatgtgcactgtcagtggcaatgagctggtcaatttc
aactgggattatccccgcaagcaggcagggaaggctgtggagccagtgaccgatttcctg
cctggatccacccatgacatccgttccatcctcatcatccagaatgcagagctagaggac
agtgggacctacgtctgcaatgtctctgagggctaccatgagaagacagaccggaaagac
atcacggtccaagtgatcgagcgtggctttgtacgcttccacacccacctggccagcacg
gtgtatgctgaggtccacaagagccacatcatccaggtggatgtggaggcctacccacag
ccaaacattgtgtggctgaagaacaacaagacattgaccatggagagcagcagcgagttc
accatcaccaacaggaacctgtcagaaaccaggtatcagacgtctctggtcctggtgcgt
gtgaagcaggaggaaggaggatattacaccatccgagcttccaatgaggatgatgcacaa
gagctgtccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggaaaac
agcagtgccagcagcggggagcagactgtaacgtgctctgctgaagggatgccccagcca
gagatcagttggtccacttgcagcaacatcaaatggtgtggcagccaggggcaacccacc
cagctgctggggaacaactctgcagagattggcctgcacactaatgctacgtaccatgca
gagctgcaggtgtaccgtgtgaacagcaccctgcagctgcacagggtggatgaacccctg
cttctgagatgcaccgtgcaaaacttcctgggctccaactcccaagacatcactctggtc
ccaaatgccttgccattcaaagtggtcatcatctccgtcatcctggctctgctggtcctc
accgtcatctccctgatcatcctgatcatcctgtggcagaagaaacctcgctatgagatc
cgctggaaggtgatcgagtcagtgagctccgatgggcacgagtacatctacgtggatccc
atgcagctcccttatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
actcttggctccggtgcctttggacgcgtggtggaggcaacagcgcatggcctgagccat
tcacagtccaccatgaaagtggcagtcaagatgctcaagtccactgcacggagcagtgag
aagcaagccctcatgtctgagctgaagatcatgagccacctgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggagggcccatctatatcatcaccgagtactgc
cgttatggggacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctat
ggcgagaaggcccgccgggaggcagagctgtatgggaataccatcaaggaggaccacgtg
cagagtcacctctccttgtctgtcgagagtgatgggggctacatggacatgagcaaggat
gagtctctggattacgtgcccatgtctgacatgaagggtgaagtcaagtatgctgacatc
gagtcttctaactatggcaccccatatgagctggacagctattccccatcagctccggaa
agaacagaccgggtgacactgataaatgaatctccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcat
cgtgacctggctgccaggaacgtcctcatctgcgaggggaagctggtgaagatctgtgac
tttggtctggcaagagacatcatgagggattccaactacatctccaaaggcagtaccttc
ttgccccttaagtggatggccccagagagcatcttcaacaacctctacaccaccctaagt
gatgtgtggtcctttgggattcttctctgggagatattcactctaggagggactccctac
cctgaactgcctatgaacgaacagttctacaatgccatcaaacgtggctatcggatgtcc
aaacctacccatgcttctgatgaaatctacgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccgtccttctcacagctggtggtgcttatgggaaacctcttggtggac
tgctacagaaagaggtaccaacaggtagatgaagagttcatgaagagcgaccaccccgct
gttgttcgcacaagacccaccatccccgggctgaacaacgccaggctccctcccagctcc
cccaccctctacacggctgtgcaccagaacgggggagagaacgactacatcatccctctt
cctgaccccaagcctgatgcaatctgtgacctccctcaggaggcctccgtcagccgtgcc
agctctatgctgaatgaagccaacacatcatctacaatatcctgtgacagccccctgggc
ccccggcaggacgaggagccagaatgtgacctgcagctgggctgccaggagctggccccg
ggtcaccacgaggtggaggagagctttctgtag

  All links  
Gene (12)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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