KEGG   Gemmatimonas groenlandica: HKW67_10960
Entry
HKW67_10960       CDS       T07783                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ggr  Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:ggr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ggr03032]
    HKW67_10960 (gyrB)
   03400 DNA repair and recombination proteins [BR:ggr03400]
    HKW67_10960 (gyrB)
Enzymes [BR:ggr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HKW67_10960 (gyrB)
DNA replication proteins [BR:ggr03032]
 Prokaryotic type
  DNA Topoisomerases
   HKW67_10960 (gyrB)
DNA repair and recombination proteins [BR:ggr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HKW67_10960 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook
Other DBs
NCBI-ProteinID: QJR35987
UniProt: A0A6M4IR72
Position
2585365..2587329
AA seq 654 aa
MANSSEQPENGYGANSITVLKGLEAVRKRPGMYIGSTSARGLHHLVYEVVDNSIDEALAG
HADRVHVIIHEDDSISVEDNGRGIPVDMHPVEKMPGVELAMTVLHAGGKFDKDTYKVSGG
LHGVGVSVVNALSKQLKVWIKRDGKEHYMDFERGITQTKLKVMRTVAAKETGTKVWFKPD
AEIFQETLRYEWVTLASRLRELAYLNKGIQITLRDERPDEMKDGQAREEVFFARGGLKEF
VTYLIGNKKPLHQDVVYIDTTRDDIGIEMALQYNDSYAENVFSFVNNINTHEGGTHLTGF
KSALTTVINKYIQEKSTLNKKDKETRLSGDDVREGLTAVLSVKVLEPQFEGQTKTKLGNS
EVEGAVRSVLNELLSQYLDEHPKSANIIIDKAMSAARAREAARKARDLTRKKSALDVANL
PGKLADCSLSDPALCEIYLVEGDSAGGSAKQGRKRDFQAILPLRGKIINVEKARFDKVLN
NEEIRTIITAIGSGIKEEFDLTKTRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIDA
GYMYIAQPPLYRVAKGKEEFYAYTEKERDGYVERLGGPEGRGNINIQRYKGLGEMNPEQL
WKTTMDPETRTMFRVTMEDAVLADQTFQTLMGDEVEPRRLFIETNARFVSNLDI
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcgaatagcagcgaacagcccgagaacgggtacggcgcaaacagcattaccgttctc
aaggggctcgaagcggtccgcaagcgccccggcatgtacatcggctccacgtcggcgcgc
ggtcttcaccacctcgtgtacgaagtggtggacaactcgatcgacgaagcgttggccggc
catgccgaccgcgtgcacgtgatcattcacgaagacgattccatctccgttgaagacaac
ggccgtggtattcccgtggacatgcacccggtcgaaaagatgccgggcgtcgagcttgcc
atgaccgtgctgcacgccggcggcaagttcgacaaggacacgtacaaagtgtccggcggt
ctccacggtgtcggcgtgtcggtggtgaacgcgctgtcgaagcagctcaaggtgtggatc
aagcgcgacggcaaggagcattacatggacttcgagcgtggcatcacgcagacgaagctc
aaagtcatgcgcactgtcgcggcaaaggaaacgggcacgaaagtgtggttcaagcccgac
gctgagatctttcaggaaacgctgcgctacgagtgggtcaccctcgccagccgtctccgc
gaactggcgtatctgaacaagggcattcagatcacgctgcgcgacgagcgccccgatgaa
atgaaggacggtcaggcccgtgaagaagtgttcttcgcgcgtggcggtctcaaggagttc
gtgacgtacctcatcggcaacaagaagccgttgcatcaggacgtggtctacatcgatacc
acgcgcgacgacatcggcatcgagatggcgctgcagtataacgacagctacgccgagaac
gtgttttcgttcgtgaacaacatcaacacgcacgaaggcggcacgcacctgaccggcttc
aagagcgcgctgacgacggtcatcaacaagtacatccaggaaaagtcgacgctcaacaag
aaagacaaggaaacgcgcttgtccggcgacgacgtgcgtgaagggctcacggccgtgctg
tcggtgaaggtgctcgagccgcaattcgaagggcagaccaagaccaagctcggtaactcg
gaagtcgaaggcgccgtacgcagcgtcctgaacgaattgctttcgcagtatctcgacgag
catccgaagtcggccaacatcatcatcgacaaggcgatgtcggccgcgcgtgcccgtgaa
gcggcgcgcaaggcacgtgacctgacgcgcaagaagtcggcgctcgacgtggccaacctg
cccggtaagctggccgactgctcactctccgacccggcactttgcgagatctatctcgtc
gagggtgactcggccggcggttcggccaagcagggtcgcaagcgcgacttccaggcaatt
ttgccgctgcgcggcaagatcatcaacgtggaaaaggcgcgcttcgacaaggtgctgaac
aacgaggaaatccggacgatcatcaccgccattggttcagggatcaaggaagagtttgat
ctgaccaagacgcgctatcacaagatcatcatcatgaccgacgctgacgtggacggcgcg
cacattcgcacgctgctgctcacgttcttcttccgtcagatgccggagctgatcgacgcc
ggctacatgtacatcgcgcagccgcccctctatcgcgtggccaagggcaaggaagagttc
tacgcctacaccgagaaggagcgcgacggctacgtggagcgactcggtggtcccgaaggc
cgcggcaacatcaacattcagcgctacaagggtctcggtgaaatgaaccccgagcagctc
tggaagaccacgatggatccggagacgcgcacgatgttccgcgtgacgatggaagacgcc
gtgctggccgaccagacgttccagacgctcatgggcgacgaagtcgagccgcgccggttg
ttcattgaaaccaatgcgagattcgtgagtaatctcgacatctag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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