KEGG   Gossypium hirsutum (upland cotton): 107915359
Entry
107915359         CDS       T04793                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107915359
Spliceosome [BR:ghi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107915359
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107915359
SSDB
Motif
Pfam: MIF4G MA3 CSNKA2IP SR-25
Other DBs
NCBI-GeneID: 107915359
NCBI-ProteinID: XP_016700010
UniProt: A0A1U8KBY6
Position
D10:complement(16436548..16447246)
AA seq 370 aa
MMKETQDKSSDEYQRLTWDALRKSIKGLVNKMASPSFTDVFAALVTVVNTKFPEVGDLLL
RKIVLQLKRAYKRNDKHQLLAAVKFIAHLVNQQVAHEIIALELLTVLLEYPTDDSVEVAV
GFVTECGSLLQDLSPKCLHVSVGCCLQGYPVVCPELDLVEEDDQLTHEISLQDEIDPEIT
LGSSDEEEDEEEDECDEEDKEQMKIKDETETNLVNLRRTIYLTIMSSVDFKEAGHRLLKI
KLDPGQESGENIPSVLWSSGVTVLHDQQNALPWHVLAYIRLTEEDTTSSSQIFIKILFQE
LSEHLGIQNLREYLKNMPRLNMQQQKPASESESSDESGSLSSSASKSANSESDSSSSDEH
EKRRKKRRRR
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgatgaaagagacacaggataagagcagcgatgagtatcagcgattaacgtgggatgcc
cttagaaaaagcatcaaagggcttgttaacaaaatggcatccccaagtttcactgatgtt
ttcgctgcattggtgactgttgttaataccaagtttcccgaagtgggggatttattgttg
agaaagattgttttacagctgaaaagagcatataagcgaaatgacaagcatcaattatta
gctgctgttaaatttatagctcatcttgtaaaccagcaagtcgctcatgagattattgct
ttggaacttctcactgttttgctggagtaccctactgatgatagtgttgaggtggctgtt
ggttttgttaccgagtgtggttcattacttcaggatctttcaccaaaatgtctccatgtt
agcgttggctgttgtttacagggataccctgttgtttgtccagaactagaccttgttgag
gaagatgaccaattaactcatgagatatctctccaagatgagatcgatccagaaataacc
cttggttcaagtgatgaggaagaggatgaggaggaggatgaatgtgatgaggaagataaa
gagcagatgaaaataaaggatgagacagagacaaatcttgtaaatcttcggaggactatc
tatctgacaatcatgtccagtgtagattttaaggaggctggccacaggctactgaaaatt
aagcttgacccagggcaagagtcaggagagaacataccttcggtattatggtcttctggg
gtaacggttttgcatgatcaacaaaatgctctgccttggcatgttctcgcctatatacgc
ttaactgaggaggacacaacttcttcttcccaaatattcattaagattctcttccaggaa
ctgtcagagcatcttggaattcagaatttacgtgagtacttgaagaacatgccacgactt
aacatgcaacaacagaaaccggcatctgaatcagaatctagtgatgaatctgggagcttg
agttcatccgcttccaaaagtgctaattctgagtcggattcatcaagttcagatgaacat
gaaaagcgcagaaagaagaggagaagacgatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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