KEGG   Gossypium hirsutum (upland cotton): 107921268
Entry
107921268         CDS       T04793                                 
Name
(RefSeq) actin-related protein 3 isoform X1
  KO
K18584  actin-related protein 3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04517  IgSF CAM signaling
ghi05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    107921268
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107921268
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    107921268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107921268
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107921268
   04147 Exosome [BR:ghi04147]
    107921268
Membrane trafficking [BR:ghi04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    107921268
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     107921268
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107921268
  Exosomal proteins of other body fluids (saliva and urine)
   107921268
  Exosomal proteins of bladder cancer cells
   107921268
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA MreB-like_C
Other DBs
NCBI-GeneID: 107921268
NCBI-ProteinID: XP_016706629
UniProt: A0A1U8L0Q1
Position
D01:52706743..52715180
AA seq 427 aa
MDPTSRPTVVIDNGTGYSKMGFAGNVEPCFNQPTVVALNDSYLNQSRASSKLNMAAQYSA
GVMADLDFFIGDEALLRSRASNTYTLSYPINHGQVEDWDAMERYWQHCIFNYLRCDPEDH
YFLLTESPLTNPENREYMGEIMFETFNIPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVG
EGATRVVPVADGYVIGSCIKSIPIAGQDVTLFIQELMRERGEKMPPEDSFEAARKVKEMY
CYTCSDIVKEFNKHDKEPAKFIKQWRGIRLKTGAPYACDIGYERFLGPEVLFSPEIYTSD
YITPLPALIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVQAAT
AHHGGDIKAKPVEVHVVSHPIQRFAVWFGGSVLASTPEFFEACHTKAEYEEHGASICRVN
PVFKGMY
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggaccctacttctcgccctaccgtcgtcatcgacaacggtactggttattctaagatg
ggatttgcgggtaatgtagagccgtgttttaatcaaccaacagtagtagctcttaacgac
tcgtatctaaatcaatccagagcttcttcaaagttaaatatggcagctcagtattcagct
ggggtaatggcggatcttgatttcttcattggagatgaagcactgttgaggtcgcgagcg
agtaacacttatacccttagctatcctattaaccatggtcaagtggaggattgggatgcc
atggaacggtattggcagcattgtatattcaactatctacggtgtgatcctgaggatcat
tactttttgttgactgagagtccacttactaatcctgagaatcgagaatatatgggcgaa
attatgtttgagacgtttaatattccgggtctttatattgctgtgaattctgtgcttgct
ttagcagctgggtacactacatctaagtgtgagatgacaggggtggtagtggatgtcgga
gaaggggctacgcgtgttgtacctgttgcagacggttatgttattgggagttgcattaag
tcaataccaatagctggacaagatgttactctcttcatacaggagctcatgcgggaaaga
ggagagaaaatgccacctgaggattcatttgaagcagctcggaaagtgaaggagatgtac
tgctatacatgttctgacattgtcaaggagttcaacaagcatgacaaagaacctgccaag
ttcatcaaacaatggaggggaattagactgaagacgggggcaccatacgcctgtgatatt
ggttatgaacgatttttaggtcctgaggttttgtttagccccgagatatataccagtgat
tatataacccctttaccagctctaatagataagtgcattcagtcagcaccaattgacaca
agaagagctttatataagaatattgtgttgtctggtggatcaaccatgttcaaagacttc
cacagaagattgcagcgggatttgaaaaagattgtggatgcccgagttcaagcagctact
gctcatcatggtggggatataaaagcaaaacctgtggaagttcatgtagtgagtcatcct
atccaaagatttgcagtttggttcggaggttctgtactagcatcaactccggaatttttc
gaggcgtgtcatacaaaagcagaatacgaggaacatggagcaagcatttgccgcgtgaat
cctgtttttaaggggatgtattga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system