KEGG   Globicephala melas (long-finned pilot whale): 115842862
Entry
115842862         CDS       T11080                                 
Symbol
TUBB4B
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04145  Phagocytosis
gmf04517  IgSF CAM signaling
gmf04540  Gap junction
gmf04814  Motor proteins
gmf05010  Alzheimer disease
gmf05012  Parkinson disease
gmf05014  Amyotrophic lateral sclerosis
gmf05016  Huntington disease
gmf05020  Prion disease
gmf05022  Pathways of neurodegeneration - multiple diseases
gmf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115842862 (TUBB4B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    115842862 (TUBB4B)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    115842862 (TUBB4B)
  09142 Cell motility
   04814 Motor proteins
    115842862 (TUBB4B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115842862 (TUBB4B)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    115842862 (TUBB4B)
   05012 Parkinson disease
    115842862 (TUBB4B)
   05014 Amyotrophic lateral sclerosis
    115842862 (TUBB4B)
   05016 Huntington disease
    115842862 (TUBB4B)
   05020 Prion disease
    115842862 (TUBB4B)
   05022 Pathways of neurodegeneration - multiple diseases
    115842862 (TUBB4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gmf03036]
    115842862 (TUBB4B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmf04812]
    115842862 (TUBB4B)
   04147 Exosome [BR:gmf04147]
    115842862 (TUBB4B)
Chromosome and associated proteins [BR:gmf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115842862 (TUBB4B)
Cytoskeleton proteins [BR:gmf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115842862 (TUBB4B)
Exosome [BR:gmf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115842862 (TUBB4B)
  Exosomal proteins of colorectal cancer cells
   115842862 (TUBB4B)
  Exosomal proteins of bladder cancer cells
   115842862 (TUBB4B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 115842862
NCBI-ProteinID: XP_030694047
Position
6:complement(1063338..1065803)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEVA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatagtgcacctgcaggccggccagtgcggcaaccaaatcggcgcaaagttt
tgggaggtgatcagcgatgagcatggcatcgaccctaccggcacctaccacggggacagc
gacctgcagctggagcggatcaacgtgtactacaacgaggccacgggtggcaagtacgtg
ccccgcgccgtgctcgtggatctggagccgggcaccatggactccgtgcgctcggggccc
ttcgggcagatattcaggccggacaacttcgtcttcggtcagagtggtgctgggaacaac
tgggctaaggggcactacacagaaggtgcagagctggtggactcggtgctggatgttgtg
aggaaggaggcggagagctgcgactgcctgcagggcttccagctgacccactcgctgggg
ggcggcaccgggtccgggatgggcacccttctcatcagcaagatccgcgaggagtacccc
gaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcggacacggtggtg
gagccctacaacgccacgctgtccgtgcaccagctggtggagaacacggatgagacctac
tgcatcgacaacgaggcgctgtacgacatctgcttccgcaccctgaagctgaccacgccc
acctacggtgacctcaaccacctggtgtcggccaccatgagtggggtcaccacctgcctg
cgcttcccgggccagctcaatgctgacctgcgaaagctggctgtcaatatggtccccttc
ccccgtctgcacttcttcatgcccggcttcgccccactgaccagccggggcagccagcag
taccgcgcgctgacggtgcccgagctcacccagcagatgtttgatgccaagaacatgatg
gcggcctgtgacccccgccatggccgctacctgaccgtggccgccgtgttccggggccgc
atgtccatgaaggaggtggacgagcagatgcttaacgtccaaaacaagaacagcagctac
ttcgtcgagtggatccccaacaacgtgaaaacagctgtttgtgacatcccgccccgcggg
ctgaaaatgtctgccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctcagagcagttcacggccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggatgccacggccgaggaggagggggagtttgaggaagaggcc
gaggaggaggtggcctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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