KEGG   Gadus morhua (Atlantic cod): 115537291
Entry
115537291         CDS       T10832                                 
Name
(RefSeq) actin-related protein 3B-like isoform X1
  KO
K18584  actin-related protein 3
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04144  Endocytosis
gmh04517  IgSF CAM signaling
gmh04530  Tight junction
gmh04810  Regulation of actin cytoskeleton
gmh05100  Bacterial invasion of epithelial cells
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115537291
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115537291
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115537291
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115537291
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115537291
   05100 Bacterial invasion of epithelial cells
    115537291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115537291
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmh04812]
    115537291
   04147 Exosome [BR:gmh04147]
    115537291
Membrane trafficking [BR:gmh04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    115537291
Cytoskeleton proteins [BR:gmh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     115537291
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115537291
  Exosomal proteins of other body fluids (saliva and urine)
   115537291
  Exosomal proteins of bladder cancer cells
   115537291
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA ALP_N Sulfotransfer_3
Other DBs
NCBI-GeneID: 115537291
NCBI-ProteinID: XP_030204958
Ensembl: ENSGMOG00000002876
Position
23:complement(5107417..5117409)
AA seq 418 aa
MSAQLPPCVIDCGTGYTKIGYAGNTEPQFIMPSCIAIRESAGVGDQAQRRLVRGVEDLDF
YIGDEAIDKPNYATKWPIRHGMVEDWDLMEKFMEQIIFKYLRAEPEDHSFLMTEPPLNTP
ENREYLAEIMFETFNIPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHAIPV
AEGYVIGSCIKHIPIAGRDITFFIQQLLRDREVGIPPEQSLETAKAVKERYCYICPDIVK
EFTKYDSDPAKWIKQYHGINSVSKNPFHIDVGYERFLGPEIFFHPEFANPDFMQPISDVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRMQRDLKRVVDARLKISEQLSGGRIKP
KPMEVQVVTHHMQRYAVWFGGSMLASTPEFLQVCHSKKDYDEIGPSICRHNPVFGVMS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcggcgcagttgccaccctgcgttatagactgcgggacggggtatactaagattggc
tatgctggaaatacagagcctcagttcataatgccctcatgtatagccatcagagagtcg
gctggggtgggggatcaggctcagaggaggcttgtgcgcggggtggaggacctggacttc
tacattggagacgaggccatcgacaagcccaactatgcaaccaagtggcctattcggcat
gggatggtggaagactgggatctgatggagaagttcatggagcaaatcatcttcaaatac
cttcgggcggaaccagaggaccacagcttccttatgacagagcctccgctcaacactcca
gagaacagagagtatctggcagagataatgtttgagacattcaacatacctgggctttac
atcgctgtacaggcagtgctagcgttagctgcatcctggacgtctcggcaggttggcgag
agaaccctgactggaatcgtcatcgacagcggagatggagtcacccatgccatccctgtg
gcagaaggctacgtgattggtagctgtatcaagcacatccccatcgctgggcgggacatc
acgtttttcatccaacagttgctgagggacagagaggtgggaattcctccagagcagtct
ctggagactgctaaagctgttaaggagcgctactgctacatttgcccagacattgtgaag
gagttcaccaagtacgactcggacccagccaaatggatcaagcagtaccacggtatcaac
tctgtcagcaagaacccattccacatcgacgtgggctacgagcgattcctcggcccagag
atcttcttccacccagagtttgccaatcctgacttcatgcaaccaatttcagacgttgtc
gatgaggtcattcagaactgtccaattgatgtaagaagaccactatacaagaacatcgtg
ctctctggggggtccaccatgttccgggactttggccgtcgtatgcagagggacttaaaa
agggtggtggacgcccggctgaagatcagcgagcagctcagcggaggaagaatcaagcct
aagccaatggaggttcaagtcgtgactcaccacatgcagcgctacgcagtctggtttgga
ggctcaatgctggcatccacgccggagtttctgcaggtatgtcactccaagaaggactac
gatgagattggccctagcatctgtcgccataatcctgtgtttggagtcatgtcttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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