Gordonia sp. SMJS1: QAD21_03720 Help Entry QAD21_03720       CDS       T10225                                  Name (GenBank) DEAD/DEAH box helicase   KO K03654   ATP-dependent DNA helicase RecQ [EC:5.6.2.4] Organism gos  Gordonia sp. SMJS1 Pathway gos03018   RNA degradation Brite KEGG Orthology (KO) [BR:gos00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     QAD21_03720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gos03019]     QAD21_03720    03400 DNA repair and recombination proteins [BR:gos03400]     QAD21_03720 Enzymes [BR:gos01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      QAD21_03720 Messenger RNA biogenesis [BR:gos03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      QAD21_03720 DNA repair and recombination proteins [BR:gos03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       QAD21_03720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII Pribosyltran NAD_binding_10 RecQ_Zn_bind HEM4 DUF3458_C Motif Other DBs NCBI-ProteinID:  WGJ86304 Position complement(794067..796187) Genome browser AA seq 706 aa AA seqDB search MAATLAPDQLTAANRVITSLAGEGAALRDDQLRAVTALAGRPADPTERGARVLVVQATGW GKSAVYWSATAIIRAGGGGPTLIVSPLLSLMRDQVAAAARGGLSAATLNSSNVDEWSMIE AQLRAGDLDVLLVSPERLANPGFGRRVLDVLAGNLGLLVIDEAHAVSDWGHDFRPDYRRV ADVLRTVNPTTPVLATTATANARVTDDVAAQLDAGSGGEPTLVLRGPLARKSLHLNVLDG LSPVQRYGWVAQSLPALPGSGIVYVLTVADADRLVEAIRAVHGDTVAVAAYTGQLDADRR HELEDALLRNEVKALVATSALGMGYDKPDLGFVVHVGSPPSPVSYYQQVGRAGRALDDAV VMLLASQTDDRIWDHFATATIPDPDKMRDLLAALESAAEPQSVVQLEAATRFRRTRIELM LKQLAVDGVTDRTADGWVVTGKPWTYDAEHYDGILAVRRREADIMRAYIAGRTCLMRLLT ESLDDPQAADCGRCSVCRGALSEGLPDSVDAEIVRTVTSTLRRKAQTLDPRKMWPGGEFG RRGRISADLLAEPGRVLAHADAPEWVEVLAAARNGDERALAELGDAAVATLAAWVRDTGI RADVIVSLRLTGTVLAETLADHLRKVGKREGDSFPVRMGDPPTDATGAVEAAYWRDHLGD PPDVAGRAVLLVVDANGSGWPITLAAAALREAGATAVLPLLIHRTV NT seq 2121 nt NT seq  +upstreamnt  +downstreamnt atggccgcaaccctcgccccggaccagctgaccgccgccaaccgcgtcatcaccagcctg gccggcgagggcgccgcgctgcgcgacgaccagctccgggccgtgaccgcactggccggc cggcccgccgatcccaccgagcgcggcgcacgcgtactggtcgtccaggcgacggggtgg ggcaagtcggcggtctactggtcggcgaccgcgatcattcgggcgggtggcggggggccg acgctcatcgtgtcgccgctgctgtccctcatgcgcgaccaggtcgccgccgccgctcgc ggtgggttgtcggcggcgacgctcaactcgtccaacgtcgacgagtggtccatgatcgag gcacagctgcgcgccggcgacctcgacgtgctgctcgtgtcaccggaacggctcgccaat ccgggcttcggtcgccgggttctcgacgtcttggccggcaacctcggcctgctcgtcatc gacgaagcacatgcggtgtccgactggggtcacgacttccgcccggactaccgccgcgtc gccgacgtgctgcgtaccgtcaacccgacgacgccggtcctggccaccaccgccaccgcc aatgcccgcgtcaccgacgacgtcgccgctcagctcgatgccgggtccggtggtgagccg acactcgtcctccgcggtccgctggcgcggaagtccctgcatctcaacgtcctcgacggc ctctccccggtccagcggtacgggtgggtcgcacagtcgctgccggctctgccggggtcg ggcatcgtctacgtgctgaccgtcgccgacgccgaccgcctggtcgaggcgatccgggct gtccatggcgacaccgtcgcggtggcggcctacaccggtcagctcgacgccgaccgccgc cacgaactcgaagacgcgttgctgcgcaacgaggtcaaggcgctcgtcgcgacgtcggcg ctcggaatgggttacgacaaacccgatctcggattcgtcgtgcatgtcgggtccccgccg tcgccggtctcctactaccagcaggtcggccgtgccggacgcgccctcgacgatgccgtc gtcatgctgctcgcgtcgcagaccgacgaccggatctgggaccatttcgcgaccgcgacc atccccgatcccgacaagatgcgtgacctgctcgccgccctggaatccgcggcggagccg cagtcggtggtgcagctcgaggctgccacccgcttccggcgcacgcgtatcgagttgatg ctgaagcaactggcggtcgacggcgtcaccgaccggaccgccgacgggtgggtcgtcacc ggcaagccctggacctacgacgccgagcactacgacggcatcctcgccgtgcgccgtcgg gaggccgacatcatgcgcgcctacatcgcgggccgcacgtgcctcatgcggttgctgacc gaatccctcgacgacccgcaggccgcggactgcggacgctgctcggtctgccggggcgcc ctcagcgaaggactccccgattcggtcgacgccgagatcgtccgcaccgtgacctcgacg ctgcgtcgcaaggcccagaccctggacccccgcaagatgtggcccggtggcgaattcggg cgtcgcggaagaatttccgccgatctcctggccgagccgggtcgtgtcctggcccatgcc gacgccccggagtgggtcgaggtgctggccgcggcccgcaacggcgacgagcgcgcactc gccgagttgggcgacgccgcggttgcgacgctggccgcgtgggtgcgcgacaccggcatc cgggccgacgtcatcgtgtcgctccgtctgaccggcaccgtcctggccgagaccctggcc gaccacctgcggaaggtcgggaaacgcgagggcgacagctttcccgtgcgcatgggcgat ccgcccaccgacgcgaccggcgcggtcgaggccgcgtactggcgcgaccacctcggcgac ccgcccgacgtcgcgggccgcgccgtgctgctcgtggtcgacgccaacggctcgggctgg ccgatcaccctggccgccgccgccctccgcgaggccggcgccaccgcggtgctaccgctg ctgatccaccggacggtgtga

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