KEGG   Gossypium raimondii: 105799060
Entry
105799060         CDS       T04129                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
gra  Gossypium raimondii
Pathway
gra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105799060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105799060
Enzymes [BR:gra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     105799060
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     105799060
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 105799060
NCBI-ProteinID: XP_012484864
Position
9:32424633..32429464
AA seq 731 aa
MVSSEGLCGSQAPIAAPVTQYGVTKPISMAGPTAADIQRSRDLEKFLVQAGLYESKEEAS
KREEVLGQIQEIVTNWVKQLTRLXGYTDQMVEDAKAVIFTFGSYRLGVHGPGSDIDALCV
GPSYVSREEDFFFVLHNILAEREEVTELQPVPDAHVPVLRFKFSGIPIDLLYASISHLVV
PHDLDISDISVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYS
NVTGFLGGVNWALLVARICQLYPNAAPSMLVSRFFRVFTQWRWPNPVMLCAIEEDRLGFS
VWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNNVCENIELNKAKW
SALFEPYLFFQSYTNYLQVDILAADADDLRSWKGWVESRLRQLTLMIERDTYGKLQCHPY
AQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQQFDIRGSVDEFRHSISMYMFWKPGMEIY
VSHVRRKQLPAYVYPDGCKRSRNLHLTPQQPSYKISRNNGVAYQAESGEKCLKRKKDPDG
ENSEQSRLDKRRSPDRNQSVSPEIVSRKLGSACTGCSTSDLDEMNRLAEANTSSNSSGIS
SCSHEDIGNESTAGSSEGSNVGDDNPSSSQSDSSDDLKSSVEDEHADQNKVFQDGLLKDL
EPKTVVGVVLKSMNGVVDSESVQNPVIRFVFEILIDFFFCVPCAMFFFILLSFGVSFVVA
LYNRLSLASTA
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggtgagttcagagggattatgtggttcgcaggcgccgatagcagcgccagtgacgcag
tatggtgtgacaaagccgatttccatggcgggccccaccgcagccgacatacaaagaagt
cgtgatttggaaaagtttttggtgcaagctgggctatatgagagtaaagaggaagcatca
aagagagaagaagttcttggtcaaattcaagagattgtgacaaattgggttaagcaactt
actcgtttgnagggttacactgatcagatggttgaggatgcaaaggcagtcatttttact
tttggttcttatcgacttggggttcatggacctggatctgacatagacgctctatgtgtg
ggaccatcttatgtgagccgagaggaagatttcttctttgtactgcacaacatcctggca
gaaagggaagaagttacagagttacaaccagttccggatgctcatgtccctgtattgaga
ttcaagtttagtggaataccaattgatcttctttatgcaagcatctctcatttggttgtc
cctcatgatctggacatctcggacatttcagtactgtacaatgttgatgagcctactgtt
cgaagtcttaatggctgcagggttgcagatcaaattctgaaactggtgccgaatgttgag
cattttcgcacaacactccgatgtctgaagttttgggctaaaaggcgtggtgtttattcc
aatgtgactggatttctcgggggtgttaactgggcgcttcttgtagctcgaatttgccaa
ctttatcctaatgcagctccaagtatgcttgtttcacgattttttagggtctttacccag
tggcgttggccaaacccagttatgctttgtgcaattgaagaagatagactcggattttct
gtttgggatcctcgtaaaaaccctcgtgataggactcatcatatgccaattatcacacct
gcctatccatgcatgaattctagctataatgtgtctacaagtacgcttcgagtcatgatg
gagcagttccaatatggtaacaacgtgtgtgagaatattgagctgaataaagcaaagtgg
agtgctctgtttgagccttacttgttcttccaaagctacaccaactatctgcaggtggac
attcttgcagctgatgctgatgacttacgttcttggaaaggctgggtggaatcccgtctg
aggcagctgactttgatgattgagcgagacacttatggaaagttgcagtgccatccttat
gctcaggattatgtagatgcctccaagccatgtgcccattgtgcattttttatgggttta
caaaggaaacatggagaaatagttcaagaaggtcaacagtttgatattcgtgggtcagtt
gatgagttccgccattcaataagtatgtacatgttttggaagcctgggatggaaatctat
gtatcccatgtccgtagaaagcagcttccggcttatgtttacccagatggctgtaaacgt
tctcggaatctacaccttactccccagcagccgtcttacaaaatatctcgcaacaatggt
gttgcatatcaagctgaatctggtgagaaatgccttaaaaggaagaaggatcccgatgga
gaaaatagtgagcaaagtaggctggataaacggaggagtcctgataggaatcaatcagtt
tctcccgagattgttagtcgcaagcttggcagcgcttgcacaggttgttctacatcagat
ctagatgaaatgaatagattagctgaagccaatacatcatcaaattccagtggtatcagc
tcttgctcacatgaggatattgggaatgaatctacagcaggtagtagtgaagggagcaat
gtaggtgacgataacccatcgtcttctcagagtgattccagtgacgatctaaaatcttct
gtggaggacgaacatgctgatcagaacaaagtgttccaagatggattgctgaaagattta
gagccaaaaactgtggttggcgtggttcttaagtccatgaacggagttgttgattcagaa
tctgtgcagaatcctgtgataaggtttgtattcgaaatcttaatagacttctttttttgt
gttccatgtgcaatgtttttctttatactgctttcttttggtgtttcttttgttgttgct
ttgtataacaggttgagtttggcatcaacagcatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (11)   

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