KEGG   Garra rufa (doctor fish): 141342996
Entry
141342996         CDS       T11039                                 
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain isoform X1
  KO
K07375  tubulin beta
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04145  Phagocytosis
grf04517  IgSF CAM signaling
grf04540  Gap junction
grf04814  Motor proteins
grf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    141342996 (tubb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    141342996 (tubb5)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    141342996 (tubb5)
  09142 Cell motility
   04814 Motor proteins
    141342996 (tubb5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    141342996 (tubb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:grf03036]
    141342996 (tubb5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:grf04812]
    141342996 (tubb5)
   04147 Exosome [BR:grf04147]
    141342996 (tubb5)
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     141342996 (tubb5)
Cytoskeleton proteins [BR:grf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    141342996 (tubb5)
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   141342996 (tubb5)
  Exosomal proteins of colorectal cancer cells
   141342996 (tubb5)
  Exosomal proteins of bladder cancer cells
   141342996 (tubb5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 141342996
NCBI-ProteinID: XP_073703687
Position
9:24764378..24770482
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEDDA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggagattgttcacatccaggccggtcagtgcggaaaccaaatcggtgctaagttc
tgggaggtgatcagtgatgaacatgggatcgacccaacaggaacctaccatggagacagt
gacctgcagctggacagaatcagcgtctactacaatgaagccacaggaggtaaatacgtg
ccaagagcgattctagttgatctggagcctggcaccatggactctgtgcgttcaggaccc
ttcggacagatcttcagaccagacaactttgtatttggacagagtggtgctggtaacaac
tgggccaagggccattacacagagggggcggagcttgtagattccgttctggatgtggtc
cgtaaggagtctgagagctgtgactgcctgcagggcttccagctgactcactccctgggt
ggtggtaccggctctggcatgggtaccctgctgatcagcaaaatccgtgaagagtatcca
gaccgcatcatgaacaccttcagcgtggtgccttcaccaaaagtctctgacaccgtagtg
gagccttacaacgccacactgtccgtccatcagctggtggagaacacagacgagacctac
tgcatagacaatgaagccttatacgatatctgcttccgcaccctcaaactcaccactccc
acatatggcgacctcaaccatctggtctccgccaccatgagtggtgtcaccacctgcctg
cgcttccctggccagctaaatgctgacctgcgcaaactagccgtcaacatggtgcccttc
ccccgtctgcacttcttcatgcccggtttcgcccctctgaccagccgaggcagccagcag
taccgcgccctcaccgtgcctgagctcacgcagcaagtgttcgacgccaagaacatgatg
gcggcctgcgatccaagacacgggcgctacctaaccgtcgccgctgtgttccgtggccgc
atgtccatgaaggaagtcgacgagcagatgctcaacgtccagaacaagaacagcagctac
ttcgtggaatggatccccaacaacgtcaaaaccgccgtctgcgacattccacctaggggt
ctcaaaatggccgtcaccttcatcggcaacagcacagccatccaagagctgttcaagcgc
atctccgagcaattcacagccatgtttaggcgtaaggctttcctccactggtacacagga
gaggggatggacgagatggagttcaccgaggcagagagcaacatgaatgatctggtgtcc
gagtaccagcagtaccaggacgccaccgccgaggaagagggcgaatttgaggaagaagct
gaggatgatgcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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