KEGG   Glycine soja (wild soybean): 114376418
Entry
114376418         CDS       T06057                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114376418
Spliceosome [BR:gsj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    114376418
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    114376418
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 114376418
NCBI-ProteinID: XP_028190322
Position
11:36828677..36834283
AA seq 860 aa
MARRSSSESEDDARKRSGSESEDEERYRYRRRGAENGKKSSGHRDDGHSGEERSGAKRDG
GMRGDRKSTSRDRKEESESSEEEGQIVNKEGVREEKGEDERLRRGGREDEGDGWGGRDSR
PGNDQGERRGKKESHRLHHGDRWRGGEEDRWRFKDCHPHSDSKEEDHRELARKSERDRDR
DRKRKVERGGDNERDRHACHDSDEEDDREFARKSERGRDRDRRRRVEKDGDNERNHREKD
VSRRQEENGKKNDRNGRMVEDANPRRGTIPGGNLNGDVSNLGKSGGVYIPPFKMAMMMKE
VQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQ
MASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVN
QQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHE
GEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEIDPEISLDIF
KPDPNFLENEKRYEELKKSMLGEESEDDEEGLDAESDDDDEDDDSDEEDEEEMQIKDETE
TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGL
LGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDLTMQESFESIFPKDNPKNTRFCIN
FFTSIGLGGLTENLREYLKNMPRLIMQQQKQVSESESDDESGSSDSSDSGSASSDSDSDS
ASSDETDRASDRRQRKRRRK
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggcgagaagaagcagcagcgagtctgaggatgacgcgaggaagcgcagtggcagcgaa
tctgaggatgaggagaggtataggtatcggcggcgcggtgctgagaatggtaagaagagt
tccggtcaccgtgatgacggtcattcgggggaagaacgaagcggagccaagagggatggt
ggaatgcgaggtgataggaagagtacgagtagggacagaaaggaggagtctgagagctct
gaggaggagggtcagattgtgaacaaagaaggggttagggaagagaagggagaggatgag
agattgcggcgtggagggagagaagatgaaggagatggctggggtggtagggattctcgt
ccagggaatgaccagggtgaaaggcgggggaagaaggagagtcacagattgcatcatggc
gatagatggcgtggaggtgaggaggacagatggagatttaaggattgccacccacatagt
gattcgaaggaggaggatcacagggagctggccaggaaatcagaaagggatagagataga
gataggaagcggaaagttgaaaggggtggagacaatgagagggatcgccatgcatgtcat
gattcggatgaagaagatgatagggagtttgctaggaaatcagagaggggtagggatagg
gataggaggcgtagagttgaaaaggatggtgacaatgagaggaaccacagggagaaggat
gtgagcaggcggcaagaagaaaatgggaagaaaaatgacagaaatggaagaatggttgaa
gatgcaaatcctcgacggggaacaataccaggaggtaacttgaatggtgatgtatctaat
ttgggcaagagtggaggtgtttacattcccccctttaagatggcaatgatgatgaaagaa
gttcaggataaaagtagtgtagaatatcaaaggttaacgtgggatgctctgagaaagagc
attaatgggcttgtaaataaggttaatgctactaatataaaaaatattattccggaattg
tttgcggaaaacctgatcaggggaaggggactcttttgtcggtcgtgtatgaagtctcag
atggcatctccgggatttacggatgtttttgctgccttggttgctgttgttaataccaag
tttcctgaggtgggggatcttttgctaagaaggattgttttgcagcttaagagagcttat
aagcgaaatgacaagcctcaattactagcagctgtcaaatttatagcacatctggtgaat
cagcaagcagctcatgagatcattgctctagagttactcacagttttactcgagaaacct
actgatgacagtgtggaagtagctgttggttttgtcacagaatgtggttcaatactgcag
gatctctcacctaaaggccttcatggtatctttgagcgttttcgtggaattcttcatgaa
ggagaaattgacaaacgtgttcagtttctgatagaaggcttatttgcaataagaaaagcg
aaatttcagggctatccagctgttcgtcctgaactggatcttgtggagcaggaagatcag
ataactcatgaagtctccttggatgaggagatagatccagagatttcccttgatatattc
aagccagaccccaatttcttggagaatgagaagcgttatgaagagttgaagaaatcaatg
ctgggtgaggagtctgaggatgatgaggaaggcttggatgctgagtcagatgatgacgat
gaagatgatgactctgatgaagaggatgaagaagagatgcaaataaaagatgaaacagag
acaaatcttgttaatcttcgaaggacaatatacttaacaattatgtctagtgttgatttt
gaggaagctggtcataagcttctgaaaattaagctagagccgggtcaagagatggaattg
tgcattatgcttttggaatgttgcagccaagagagaacttatcttcgatattatggtctt
ctggggcagcgtttctgcatgatcaacaaagtacaccaagaaaattttgaaaagtgtttt
gtgcagcagtactcaatgattcaccgacttgaaacaaataaactgcgaaatgtggcaaag
ttttttgctcatttacttggcacagatgctctaccttggcatgttttatcttatatacgc
ttgactgaagaggacacaacttcttcttcacgtatatttattaagattctcttccaggaa
ttatcagaacatcttggaatccgactgctaaatgagcgattaaatgatctaacaatgcaa
gaatcttttgaatccatatttccaaaagataatccaaaaaacacacggttctgcattaac
ttctttacatctattggtcttggtggtcttaccgagaacctacgtgagtatttgaagaat
atgccacgtcttatcatgcaacaacagaaacaagtttcagaatctgaatcagatgatgag
tcagggagttctgattcatcagattctggatcagctagttcagactcagactcagactca
gcaagttctgatgaaactgaccgtgcgagtgacagaagacaaagaaagcggaggagaaag
tga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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