KEGG T06057: 114423299

Glycine soja (wild soybean): 114423299

Entry

114423299         CDS       T06057

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

gsj Glycine soja (wild soybean)

Brite

KEGG Orthology (KO) [BR:gsj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114423299
Spliceosome [BR:gsj03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    114423299
Complex C
   U4/U6.U5 tri-SnRNP related factors
    114423299

SSDB

Motif

Pfam:

MA3

Other DBs

NCBI-GeneID:

114423299

NCBI-ProteinID:

XP_028245805

Position

8:42355006..42360972

AA seq 871 aa
MARRHSRSSESSEDDVRKRRGSESEDEERDRRYRRGGWSNKKSSGHRSSRENGDGSDSGE
ERNGAKRDGKSKSRERKESESSEEEGQIVSKERVREEKKEDARLQRRHDGRGGRDNEGDD
RDGRESHRGNDQDEKRGETESHRLHHGDRWRGGDEDRRKINDHRGRHDSEEEDYRVLARK
SERDRDNNRDRDRRQRVEKGGDNERDRRMRHNSEEEDARELARKLDRDRDRDRDRDRRRR
VEKDGGSERNHREKDVSKRQEESRKKEDGNGRMVEDEKPQRQATIPGGNLNGDASNLGKS
GGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAEN
LIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRND
KPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSP
KGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHE
VSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDSESDDDDDEDD
ESDEEEEEQMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIM
LLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVGKFFA
HLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQESF
ESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQKQVSESESDDESGS
SDSSDSGTASSDSDSASSDESDRRRRKRRRK

NT seq 2616 nt +upstreamnt +downstreamnt
atggcgagaagacacagccgcagcagcgagtcgagtgaggatgacgtgaggaaacgccgt
ggtagtgaatctgaggatgaggagagggataggaggtatcggcgcggtggttggagtaat
aagaagagttccggtcaccgtagtagcagggagaacggtgatggcagtgattcgggagaa
gaaagaaatggtgctaagagggatgggaagagtaagagtagggagagaaaggagtctgaa
agctctgaggaggaaggtcagattgtgagcaaagagagggttagggaggagaagaaggag
gatgcaagattgcagcggcgtcatgatgggcgtggagggagagacaacgaaggagatgac
cgggatggtagggagtctcatcgagggaatgaccaggatgaaaagcgaggggagacagag
agtcacagattgcatcatggtgatagatggcgtggaggtgatgaggacaggcggaaaatt
aatgatcatcgtgggcgacatgattcggaggaagaggattacagggtgctggccaggaaa
tcggaaagggatagagataataatagggatagggataggagacagagagttgaaaagggt
ggtgacaatgagagggatcgccgcatgcgtcataattcggaggaagaagatgctagggag
ttggctaggaaattggatagggatagggatagggacagggacagggataggaggcgtaga
gttgaaaaggatggtggcagtgagaggaaccatagggagaaggatgtgagcaagcggcaa
gaagaaagtaggaagaaagaggatggaaatggaagaatggttgaagatgaaaaacctcaa
cgacaggcaacaataccgggaggtaacctgaatggtgatgcatctaatttgggaaagagt
ggaggtgtttacattcccccctttaagatggcaatgatgatgaaagaagttcaggataaa
agtagtgttgaatatcaaaggttaacgtgggatgctttgagaaagagcattaatgggctt
gtaaataaggttaatgctactaatataaagaatattattccagaattgtttgcggaaaac
ctgattagaggaaggggactcttttgtcggtcatgcatgaagtcgcagatggcatctccg
ggatttacagatgtttttgctgccttggttgctgtcgttaatactaagtttcctgaagtg
ggggatcttttgctaagaaggattgttttgcagctgaagagagcttataagcggaatgac
aagcctcaattactagcagctgttaaatttatagcgcatctggtgaatcagcaagcggct
catgagatcattgctcttgagttactcacagttttactcgagaaacctactgatgacagt
gttgaagtagctgttggttttgtcaccgaatgtggttcaatactgcaggacctctcacct
aaaggccttcatggtatctttgagcgttttcgtggaattcttcatgaaggagaaattgac
aaacgtgttcagtttctgattgaaggtttatttgcaataagaaaagcaaagtttcagggc
tatccagctgttcgtcctgaactagatcttgtggaacaggaagatcagataactcatgaa
gtctccttggatgaggagatagatcccgagatttcccttgatatattcaagccagacccc
aatttcctggagaatgagaagcgttatgaagagttgaagaaatcaatgctgggtgaggaa
tctgaagatgatgaggaaggcttggattctgagtcagacgatgatgatgatgaagatgat
gagtctgacgaagaggaagaagaacagatgcaaataaaagatgaaacagagacaaacctt
gtcaatcttcgaaggacaatatatttaacaattatgtctagtgttgattttgaggaagct
ggtcataagcttttgaaaattaagctagagccaggtcaagagatggaattgtgcattatg
cttttggaatgttgtagccaagagagaacctatctcagatattatggtcttctggggcag
cgtttctgcatgatcaacaaagtacaccaagaaaattttgaaaagtgctttgtgcaacag
tactccatgattcaccggcttgaaacaaataaactgcgaaatgtgggaaagttttttgct
catttacttggcacagatgctctaccttggcatgttttatcatatatacgcttgactgaa
gaggacacaacttcttcttcacgtatatttattaagattcttttccaggaattatcagaa
catcttggaattcggctgctaaatgagcggttaaatgatccgacgatgcaagaatctttt
gaatccatatttccaaaagataatccaaaaaacacacgattctgcattaacttctttaca
tccattggtcttggtggtcttactgagaacctacgtgagtatttgaagaatatgccacgt
cttatcatgcaacaacagaaacaagtttcagaatctgaatcagatgatgagtcaggaagt
tctgattcatcagattctggaacagctagttcagactcagactcagctagttctgatgaa
agtgacagaagacgaagaaagcggaggagaaagtga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF

DBGET integrated database retrieval system