KEGG   Gavia stellata (red-throated loon): 104250639
Entry
104250639         CDS       T08384                                 
Symbol
POLB
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104250639 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gste03400]
    104250639 (POLB)
Enzymes [BR:gste01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104250639 (POLB)
DNA repair and recombination proteins [BR:gste03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     104250639 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     104250639 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_5 NTP_transf_2 HHH_8 HHH_3 Cdd1 HHH_RS2-RL21-YNQ2 DUF6932 MTPAP-like_central
Other DBs
NCBI-GeneID: 104250639
NCBI-ProteinID: XP_009808112
Position
Unknown
AA seq 273 aa
DGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINLLTRVTGIGPAAARKFVEEGIRTL
EDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVKKLDPNYIATVCGSFR
RGAESSGDMDVLLTHPNFTSESSKQSKLLRQVVEQLEKVHFVTDMLSKGDTKFMGVCQLP
NKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEMGFTINEYTIRPLG
VTGVAGEALPVECEKDIFDYIQWKYRDPKDRSE
NT seq 822 nt   +upstreamnt  +downstreamnt
gatggagtaggtgctaaaatagctgagaagatagatgagttcttatccactggaaaacta
cgcaaattggaaaagattcgacaagatgatacaagtgcatctatcaatctcctgacacga
gttactggcattggtcctgctgctgctaggaagtttgtcgaggaaggaattaggacttta
gaagatctaagaaaaaatgagcacaagctgacccatcaccagcgaattgggttgaaatat
tttgaagattttgagaaaagaatcccgagggaagaaatgctgcaaatgcaggaaattgtg
ctgaaagaggtaaagaagctggacccaaactatattgctacagtctgtggcagttttaga
cgaggcgcagagtcaagcggcgatatggatgttctcctaacccatccgaatttcacatct
gaatcatccaaacagtcaaaacttctgcgtcaagttgtagaacaactggaaaaagtccac
tttgtcacagatatgctgtctaaaggtgacaccaaattcatgggtgtctgtcaactgcca
aataaagaagatggaacagcctatccccacaggagaattgatatccggcttatccccaaa
gatcagtattactgtggtgtactgtatttcacaggaagtgatatatttaataagaacatg
agaactcacgctctggaaatgggcttcacgatcaatgagtatacaatccgtcccctgggt
gtcactggagtcgctggggaggccctaccagtagaatgtgaaaaagacatctttgactat
atccagtggaaataccgagacccaaaggatcggagtgaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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