KEGG   Haloarcula sp. CBA1115: SG26_08340
Entry
SG26_08340        CDS       T03645                                 
Name
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hab  Haloarcula sp. CBA1115
Pathway
hab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SG26_08340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hab03400]
    SG26_08340
Enzymes [BR:hab01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SG26_08340
DNA repair and recombination proteins [BR:hab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SG26_08340
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AJF25735
UniProt: A0A0B5GIV4
Position
complement(1679757..1680344)
AA seq 195 aa
MEQMDGLNVVGCERCDDLCRSRSRIVNGVGPADADLLFVGEAPGANEDEQGEPFVGRSGD
VLDEALREAGLDRGDVRITNCVRCRPPDNRDPRTGELANCRDYLETEIDRVDPEVVVTLG
KVPAEHLLERDVAVTGEAGDVFDVAIAGQPRRVLVSVHPAATLYDPSQKETFEAAITTAA
EFTDAQSGQSRLGEF
NT seq 588 nt   +upstreamnt  +downstreamnt
atggagcagatggacggcctcaacgtcgtcggctgtgagcgctgtgacgacctctgccgc
tcgcgctcgcgaatcgtcaacggcgtcggccccgcggacgcggacctgctgttcgtcggg
gaggcccccggcgcgaacgaggacgaacagggcgagccgttcgtcgggcggagcggcgac
gtgctcgacgaggcgttgcgcgaggccggcctcgaccgcggcgacgtgcgcatcaccaac
tgtgtgcgctgtcgcccgccggacaaccgcgacccgcgaacgggtgaactcgcgaactgc
cgcgactatctggagacggagatcgaccgcgtcgaccccgaggtcgtcgtcacgctcggg
aaagtgccggctgagcacctgctggagcgtgacgtcgccgtcaccggcgaagcgggcgac
gtgttcgacgtggctatcgccggccagccacgccgcgtgctcgtctccgtccacccggcg
gcgacgctgtacgaccccagccagaaggagacgtttgaggccgcgataacgactgccgcg
gagttcaccgacgcccagagcggacagtcgcggctcggcgagttttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

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