KEGG   Haloarcula sp. CBA1115: SG26_19010
Entry
SG26_19010        CDS       T03645                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hab  Haloarcula sp. CBA1115
Pathway
hab03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SG26_19010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hab03021]
    SG26_19010
Transcription machinery [BR:hab03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     SG26_19010
 Prokaryotic type
  Archaeal type
    TFB
     SG26_19010
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Auto_anti-p27 Sigma70_r4 TruB_C Cyclin_C Cas12f1-like_TNB HTH_11 Zn_ribbon_NUD
Other DBs
NCBI-ProteinID: AJF27863
UniProt: A0A0B5H1Z8
Position
unnamed2:complement(56985..57974)
AA seq 329 aa
MSTDSSSVATKHTEQPERNSAETHDRLSTIDQCPECSVVKLRRDGTERYCPECGLVVDED
CIDYGPEWTPYDAEERRRVGGPVTNSRHDWGISAEIGRYRDARGQQLPAAKRRKLHRLRR
WDRQAQFEGKAEQNLAHGLSEVRRIVGSLDLPESICTQACVLYRTAATEDLIRGRSIEAM
AAAGVYAACRCSGLPRTIDEVGEVSTVSRERVSNAYSVLNHELNLPAVPMAPVQYVPRFA
SDLDLSREVRQRALELAREASEVGLGNGCRPTGVAAACIYEAAREADENVTQTSLAELAS
VSAMTLREQWKKLQSMLEHEEESGLEVHG
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtctacagattcatccagcgtcgcgaccaagcacactgaacagcctgagaggaacagt
gctgagactcacgaccggctctctacgatcgatcagtgccccgagtgctctgtggtcaag
ctcagacgagacggtaccgagaggtactgtcctgagtgtgggctcgtcgtcgacgaggat
tgtatcgactacgggcctgaatggacgccatatgacgccgaagagcgacgtcgcgttggt
gggccagtgacgaattcacgccacgactggggcatctctgcagagatcggccggtatcgc
gatgcacgagggcagcaacttccggctgcgaaacgtcggaaactgcaccggcttcggcga
tgggaccgccaagcccagttcgaagggaaagctgagcagaaccttgcacatgggctctcg
gaagtccggcggatcgtcggttcgctcgaccttcctgagagcatctgtacgcaggcgtgc
gtcctctatcggactgctgcgaccgaggacctcatccgtggtcgctcgattgaagcaatg
gcggctgccggcgtgtatgcagcctgtcgatgttcgggactccctcggacaatcgacgag
gtcggagaggtgtcgactgtctccagagagcgggtcagcaacgcgtacagcgtgttgaat
cacgaactgaatctcccggccgttccgatggctcccgttcagtatgtcccacgattcgca
tcggacctcgatctctcacgagaagtgcgccaacgcgccctggagttggcccgagaagcg
tccgaagtcggtctcgggaacggctgtcgaccaaccggcgttgccgctgcctgcatctac
gaggccgctcgtgaggctgacgagaacgtcacccaaacgagtctcgccgagctcgcgagt
gtctccgctatgacgctccgtgagcaatggaagaaactccaatcgatgctcgaacacgaa
gaggagtctggattggaggtacacggatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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