KEGG   Halomonas sp. BDJS001: OM794_00920
Entry
OM794_00920       CDS       T10426                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
habd  Halomonas sp. BDJS001
Pathway
habd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:habd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OM794_00920 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:habd03021]
    OM794_00920 (rpoA)
   03400 DNA repair and recombination proteins [BR:habd03400]
    OM794_00920 (rpoA)
Enzymes [BR:habd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OM794_00920 (rpoA)
Transcription machinery [BR:habd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     OM794_00920 (rpoA)
DNA repair and recombination proteins [BR:habd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      OM794_00920 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD Acyl-CoA-dh_C
Other DBs
NCBI-ProteinID: UZH10358
UniProt: A0A9E8D743
Position
184896..185891
AA seq 331 aa
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLTLNKQGPAVVTAGDIALDHS
VEIVNPDHIIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcagcgttcagtgacagagtttctccgtcctcgcgacatcaaggtcgaagaaatcagc
gcacatcacgccaaaatcgtgctcgaaccgttcgagcgtggctttggtcacaccctgggg
aatgcactacgtcgcattctgctttcttctatgcccggctgtgccgtggtagaggctgaa
atcgccggcgtcgagcatgaatacagtgcgctcgaaggggtgcaggaagatgtcattgag
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
acgctgaacaagcagggcccagccgtcgtcactgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccacatcattgctcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggctacgagccggctgacgcgcgcggctctgat
gaagagacacgtgccattggccgcctgcagctggatgccaccttcagccctgtccgccgt
gtttcctactcggttgaagctgctcgtgtcgagcagcgcaccgatctcgataagttaatt
atcgatctggagaccgacggtaccctggatccggaagaggctatccgtcgcagtgcgacc
atcctgcaagagcagctggccgccttcgtcgacctggaagctgataaagagcaggaagtc
gaagaggaagaggatcatgtcgatccaattctattgcgccccgtagacgatcttgagttg
accgttcgcagcgcgaactgcctaaaagccgagaatatttactatatcggtgatctcatt
cagcgcacagaagtggagctgttgaagacaccgaacctcggtaaaaagtctttgaatgaa
atcaaagacgtattggcggcgcgtggcttgtccctcggtatgcggctggaaaattggcca
cccgctagcctgaaggacgacaaggcctccgcgtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

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