KEGG   Helianthus annuus (common sunflower): 110872498
Entry
110872498         CDS       T05101                                 
Name
(RefSeq) pre-mRNA-splicing factor cwc22
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:han03041]
    110872498
Spliceosome [BR:han03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    110872498
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    110872498
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 110872498
NCBI-ProteinID: XP_021976992
Position
8:complement(28494963..28497893)
AA seq 576 aa
MEMEMQGNDKDRGTRDRRDKVSSKQHTGSSDNRIIQKLEKTGGGVYIPPFRLPSMMPEVE
DKSSLEYQKMTWDALKKSINGLVNKVNAANIKDIVPELFSENLLRGRALFAQSCIKSQMA
SPAFTDVFAALVAVVNTKFPQVGELLLRMIILRLRRAYKRNDKHQLVAAAKFIAHLVNQQ
VAHELIALELLTLLLENPTEDGVEVAVAFVAECGSALQDLSPKGLHGIFERFRGILHEGA
MDKRVQFLIEGLFALRKAKFQGHPAVRPELDLVELEDQITHQASLLDEMNAEDDLVVFKL
DPDFLENEKRYEDLKKTILGNEADGGDEGSDEDESSHKEESDGEQMRIADETGTDLVNLR
RSIYLTIMSSVDFEEAGHKLLQIKLEPGQEMELCTMLLECASQEKTYRRYYGLLGQKFCM
INRVYQDNFEECFVQQYSMVHRLETNKLRNVGMFFAHLLGTDALPWHVLAYIRLTEEDTT
SSSRIFIKILFQELSEHLGVQRLKERLSDPSLHADFESIFPRDSPKNTRFSINFFTSIGL
GGITEELRGYLKSMHMQQSEEDPSDETHRKRQRKCC
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggagatggagatgcaagggaacgataaggatagggggacaagagacaggagagataag
gtgtcgtcgaagcagcataccggaagcagtgataacaggataatccaaaagctagaaaag
actggaggaggggtatacataccgcctttcaggttgccttctatgatgcctgaagttgag
gataaaagcagcttggaatatcaaaagatgacatgggatgcattaaagaagagcataaac
ggcttggtcaacaaggtcaatgcagcaaatatcaaggatatcgttcccgagttgttttct
gaaaatttgctcaggggaagagctttgtttgctcaatcgtgtataaagtcccagatggcc
tctcctgctttcactgatgtctttgcagctctcgttgctgttgtaaacaccaaattccct
caagtgggtgagcttttgttgagaatgataattttgcggcttcgaagagcgtataagaga
aacgacaagcatcaattggttgctgccgccaagtttatagctcatttggttaaccagcag
gttgctcatgagcttattgctctcgagcttctcacacttctcttagaaaatccaactgaa
gacggagttgaggttgctgttgcttttgttgctgaatgcggttcggcactccaggatcta
tctcctaagggcttgcatggtatttttgagcgcttccgtggaattcttcacgagggagcg
atggataaaagggtacagttcttgattgaaggcctctttgccttaaggaaggccaagttc
cagggccatccggctgtccgtccagagttagaccttgttgaattggaagatcaaatcacg
caccaagcatctcttcttgatgagatgaatgcagaggatgacttagttgttttcaagttg
gatcctgattttctggagaacgagaagcggtatgaagatttgaaaaaaaccattcttggc
aatgaagcagatggcggtgatgaggggtctgatgaagacgaatcttcacataaagaggag
tcggatggggaacagatgaggatagcagatgaaaccggaacagatctggttaaccttcga
agaagtatctaccttaccattatgtcgagtgttgattttgaggaagctggtcataagctc
ctccaaatcaaactcgagcctgggcaagagatggagctgtgcacaatgttgttggagtgt
gctagtcaggagaaaacgtatcggcgttactatgggcttctgggccagaagttttgcatg
atcaacagagtctaccaagataactttgaggaatgttttgttcagcagtactccatggtc
cataggcttgagacaaacaagctgcgtaacgtgggcatgttttttgcgcatctgcttggg
accgatgctctgccgtggcatgttttggcatatatccggttgactgaggaggacaccact
tcctcctctagaatattcatcaagattctcttccaggagctgtcggaacatcttggagtt
cagcggttgaaggagcgtcttagcgaccctagcttgcatgctgattttgaatcgattttt
ccaagggacagcccgaaaaacacacgcttttcaattaatttcttcacgtcgattgggctc
ggcgggatcaccgaagaactcagaggctatttgaaaagcatgcacatgcaacaatcggag
gaggatccgtctgatgaaactcatcgcaagcgccaaagaaaatgctgttag

  All links  
Gene (12)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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