KEGG T05150: 110667254

Hevea brasiliensis (rubber tree): 110667254

Entry

110667254         CDS       T05150

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

hbr Hevea brasiliensis (rubber tree)

Brite

KEGG Orthology (KO) [BR:hbr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hbr03041]
    110667254
Spliceosome [BR:hbr03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    110667254
Complex C
   U4/U6.U5 tri-SnRNP related factors
    110667254

SSDB

Motif

Pfam:

MA3 MIF4G HEAT_5MP1_2

Other DBs

NCBI-GeneID:

110667254

NCBI-ProteinID:

XP_021683744

Position

Unknown

AA seq 815 aa
MARKYSDSSDDERSRYRRRERRSDSRHGDDNDKDGGRIGEQEGRDREEKREREVRERRSS
RVSSDEEGELVERERDERERERNIDRRDRVKEYNQSSDEGDYRERRDRHERERNRRHENV
HIRGEAEDRSRDLQWKSERERDRIDEDRRRRHRNRDDGENGRRKEKDEVRGDGERGKLVE
DSKPVKTTIGEGNLNADASNLGRSGGVYIPPFKLARMMKEIQDKSSVEYQRLTWDALRKS
INGLVNKVNATNIKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTK
FPEVGELLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLAVLLENP
TDDSVEVAVGFVTECGSILQDVSPKGLDGAFERFRGILHEGEIDKRVQFLIEGLFAIRKA
KFQGYPAVRPELDLVEQEDQLTHEISLQENIDPEISLDIFKPDPNFLENEKRYEELRKNI
LGEESEDEEGSDADSGDEDEDEDEDEEEEEEEDDDDEQQMQIKDETETNLVNLRRTIYLT
IMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVYQ
ENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIF
IKILFQELSEHLGIRTLNERLTDPAMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITEN
LREYLKNMPRLIMQQQKPVSESESESESDDESGSGGSESESESDSSSSDEDERHVKRSRS
DGDERSRSRGDRDERSRKRSRNDRDERNRKHSRRD

NT seq 2448 nt +upstreamnt +downstreamnt
atggctagaaaatacagtgattccagtgacgatgaaaggagtaggtatcgtcgtcgtgag
agaagaagcgacagtagacacggtgacgataatgataaggatggaggaagaattggtgag
caggaaggtagagatcgagaggaaaagagggaaagagaggttcgagaaaggaggtcatcg
agggtaagttctgatgaggaaggagaattagtagagagagaaagggatgaacgagagaga
gagagaaatattgaccgtagggatagggttaaagagtataatcagagttctgatgaaggt
gattaccgggagaggagagacaggcatgaaagagaaagaaaccgtcggcatgaaaatgta
catataaggggagaagctgaggatagaagtagggacttacaatggaaatcagaacgagag
agggatagaattgatgaagacaggcgtaggaggcataggaacagggatgatggggaaaat
gggagacgtaaagagaaagatgaagtgcggggagatggcgagcgtggaaagttggttgaa
gactcaaaacccgtcaaaacgacaattggagaaggaaatttgaacgctgatgcatcaaat
ttgggtagaagtgggggtgtttacatacctcctttcaaattggcccgaatgatgaaggaa
attcaagataaaagctctgtggagtaccagaggttgacatgggatgcccttcgtaagagt
attaatgggcttgttaacaaggttaatgccaccaacataaagaacattattccagaactt
ttttctgagaatctgattcgagggaggggtcttttttgtcggtcatgtatgaagtcccag
atggcgtctcccggtttcacagatgtttttgctgcgctggtagctgttgtaaacactaaa
tttcctgaggtgggtgagctcttattgagaaggatagttttacagctcaagagagcatat
aagcggaatgacaagcctcaattgctagctgctgtaaaatttatagcacacctagtgaac
cagcaagtggctcatgagattattgctctagaacttcttgctgttttgctggagaatccc
actgatgacagcgttgaggttgcggttggttttgtcacagagtgtggatccatacttcaa
gatgtctcgccaaaaggcctggatggagcttttgagcgatttcgtggaattcttcatgaa
ggagagattgacaagcgggtgcagtttttgattgaaggcctttttgcaattagaaaagcc
aaatttcaggggtaccctgctgtccgtccagagttggaccttgtggagcaggaagaccag
ttaacgcatgagatatcactccaggagaacatagatcctgagatcagccttgatattttc
aagccagatcctaatttccttgaaaatgagaagcgctatgaagaattgaggaaaaatatc
cttggtgaggagtctgaggatgaagaaggttctgatgcagattcaggtgatgaggatgag
gatgaggatgaggatgaggaggaggaggaggaggaggacgatgacgacgaacaacagatg
caaataaaagatgagactgaaactaatcttgtaaatcttcggaggacaatttatctaact
atcatgtccagtgtagattttgaggaggctggccacaagttactgaaaattaaacttgag
ccaggacaggagatggaattatgcatcatgcttttggaatgttgcagtcaggagagaact
tatctccggtactatggtcttttggggcagcgattttgcatgatcaacaaagtctaccaa
gaaaattttgagaaatgctttgttcaacaatattccatgattcatcggctagaaacaaat
aagttacgtaatgtggcaaagttttttgcccatttacttggtactgatgccctgccttgg
catgtattggcctatatacggttaactgaagaggacaccacttcctcttctcgtatattt
atcaagattctcttccaggagttgtcagagcatctgggaatccgcacattgaatgagcgc
cttacagatcctgccatgcaagactcatttgaatctattttccctagagataatccaaag
aatacacgcttttccatcaatttcttcacatccatcgggcttggtggcatcaccgaaaat
ttgcgcgaatacttgaagaatatgccaaggcttatcatgcaacagcaaaaacctgtctca
gaatctgagtcagaatctgaatcagatgatgaatcagggtctggtggttcggagtctgaa
tcagagtcagattcatcaagttctgatgaggatgaaagacacgtgaagcggagtagaagt
gatggggatgaaagaagcaggagtagaggtgatagggatgaaagaagcaggaagcgaagt
agaaatgatagggatgaaagaaacaggaagcatagtaggagagattag

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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