KEGG   Hippocampus comes (tiger tail seahorse): 109520519
Entry
109520519         CDS       T04969                                 
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03030  DNA replication
hcq03410  Base excision repair
hcq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109520519
   03410 Base excision repair
    109520519
   03450 Non-homologous end-joining
    109520519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcq03032]
    109520519
   03400 DNA repair and recombination proteins [BR:hcq03400]
    109520519
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hcq04147]
    109520519
DNA replication proteins [BR:hcq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109520519
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109520519
DNA repair and recombination proteins [BR:hcq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109520519
Exosome [BR:hcq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109520519
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 XPG_I_2
Other DBs
NCBI-GeneID: 109520519
NCBI-ProteinID: XP_019733357
Position
Unknown
AA seq 354 aa
MGIIKLADLIRLEAPGAISHKDISDYTVSAYSTGKIIALDTSIVMNQFRTAAPSLNPLTG
LFFRTLTFLEHEIKPVFVFDGRPPGEKLAILQKRAEAAGWRSPNHLGTASPQTKDCVHLL
KLLGVPVVQAPGDAEAFCAWLVRQGAAESVASEDMDTLPFGAHVLIRQLNAKRDSDIVEY
SLPKLLEKLQLTHKEFVDLCILLGCDYCDKIAGLGPKRALRLIQKYRTIENVVLHINRKT
HPVPDNWKYEDARKLFVETPHAEVPELMWTEPDEEALVGFFCKCTHVKEERVRRRMERFR
QIRESTRKQREEATAAGQGRQTRMDDFFRVLRKRKQPVEAAESGNSKRKKPKLK
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggggattattaaactggcagatttgattcgattggaagctcccggtgcgatttcccac
aaagatatcagtgactatacagtttctgcttactccacaggcaagataattgcattggat
acatcaattgtgatgaaccagttccgtacagcagcaccatcactcaatccgctgaccggt
ctgttctttcgcacgctgaccttcctggaacacgagataaagcctgtgtttgtgtttgat
ggaaggcctccaggagaaaagctcgctattcttcagaaacgagccgaggcagcgggttgg
cgctcccccaaccatttgggcacagcatcaccccaaacaaaagactgtgtccatctcctg
aagcttctgggtgtgcctgtggtccaagctccgggagatgctgaggctttttgcgcttgg
ctggtgcgacagggggctgcggaatctgtggcatcggaggacatggacacattgccgttt
ggagcgcatgttctgattcgtcaactgaatgctaagagagacagtgatattgtggaatat
tctttaccgaagttgttggagaagctccaactaactcacaaagagtttgttgacctgtgc
atcttgctgggatgcgactactgtgacaagatagctggtttaggtccaaagagagctctg
agactcatccaaaagtaccgcactattgaaaatgtcgttttgcacatcaacagaaagacc
catccggttccagataattggaaatacgaagacgcgcggaagttatttgtggaaacgcca
cacgcagaagtacccgagttgatgtggactgagccggacgaagaagccttggttgggttt
ttctgcaagtgcacacatgtcaaagaagaacgagtccgtcggcgcatggagagattccga
cagatacgcgagagtacgagaaagcagagggaggaggcgacggcagcgggacaagggagg
caaactcggatggatgactttttcagagttcttcgaaagaggaagcagcctgtggaagct
gcagaaagtggaaacagcaagagaaagaaaccaaaactgaaatga

  All links  
Gene (8)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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