KEGG   Hippocampus comes (tiger tail seahorse): 109522858
Entry
109522858         CDS       T04969                                 
Symbol
pnn
Name
(RefSeq) pinin isoform X1
  KO
K13114  pinin
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03013  Nucleocytoplasmic transport
hcq03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109522858 (pnn)
   03015 mRNA surveillance pathway
    109522858 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109522858 (pnn)
   03041 Spliceosome [BR:hcq03041]
    109522858 (pnn)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     109522858 (pnn)
Spliceosome [BR:hcq03041]
 Complex C
  Other components
   EJC/TREX
    109522858 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 109522858
NCBI-ProteinID: XP_019737248
Position
Unknown
AA seq 690 aa
MAVAVRSLQDQIEKAKESLKNVDDNIRKLTGRDPNEFRPGQLRRFGGPMAGVAVAAMGGG
GRGRGFNLLRRSLSDIGGGGPPAKQRDIDGALLRLAGDQRARRDVRHDSDAEDDDDVKKP
ALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVCTEKQKRR
SEIEQKLEVQAEVEKKKLESEKRELFEERRAKQTELRLLEQKVELAQLQEEWTNHNNNLV
KFIRTKTRPHIFYRPGKMCSASQKLLDDSTKKLNAVFEERREAFTEHINKMESRPRRQLN
RDQDGSSAATGKDHSAEGKPAGQVDKVTGNKRTARMEEDDDDEEEEEDQEEEEKEKGVDG
EQGEASEVAGKGELEEGGDSREGLNEDEGMEFEEAGNGEKAGEEKEKTQVRGEKEEEARP
GSEEVEVEAGKEQGDSSKTEQDEDSKEGPSDLETEKTEITPPCEPIASQQEATRSAQLGP
PNPTPEEPAASLAEPQMAPTTETVSGAAGQEPAVPSAEIPDSASLNPAEQRQPGDESAVK
PQPDSQAAPSSPSALLKEQKEGARGRKKAKESKKGRSQSRSSSSSSCGSSSSGSSSSSSA
SSHSSSSSSSSTSSSSSRSRSRESGKRSKRPSGRDKKKEERSHRKKGGSSGGAGGKDAKE
GRKRKSNEGRSRSYRSDREQKDRDRKDKRR
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggcggtggccgtgcggagcttacaagaccagattgaaaaagccaaagaaagcttgaaa
aatgttgacgataatattcgtaaattaaccggacgagatcccaatgaattcagaccgggc
cagctgcgccggttcggtgggcccatggcaggcgtggcagttgcagcaatgggaggagga
ggtagaggaagaggatttaacctgctcagacgcagtctctccgacattggcggcggtggc
ccccctgccaagcagagggacatcgacggtgctttgttaaggctggcaggcgaccagagg
gccaggagagatgtgcgtcacgacagcgacgccgaggatgatgacgatgtcaaaaagccg
gcgttgcagtcgtcagttgtagctacctccaaggagagaacacgccgggacctcattcaa
gaccagaccatggatgagaaaggcaaacagaggaatcggcgcatgttcggcctgctcatg
gggactctgcaaaaatttaaacaagagtcgaacgtttgtacagagaagcaaaagcggcgc
tctgagatcgagcagaagcttgaggttcaggctgaggttgagaagaagaagttggagagc
gagaagagggagttgtttgaagagaggagagccaaacagacagagctgagactgctcgaa
cagaaagtggaattggctcagttgcaagaggagtggaccaaccataacaacaatctggtg
aaattcattcgcaccaagaccaggccacacatcttctaccgacctgggaagatgtgctcc
gccagccagaaactcctcgacgactccaccaagaaactaaatgctgtgtttgaagagcgg
cgcgaagcattcacggaacacatcaacaagatggagtcccgaccacggcggcagctaaac
cgcgaccaggacggcagctctgcggcgacagggaaggaccactcggcggagggtaagcca
gcaggtcaggtagacaaggtgacaggtaacaagaggactgcgcgcatggaggaagatgat
gatgatgaggaggaggaggaggatcaggaagaggaggagaaagagaagggggtggatgga
gaacagggggaggctagcgaggtcgcggggaaaggcgagctagaggaagggggggatagc
agggaaggcttaaatgaggacgaggggatggaatttgaggaggcagggaatggggagaag
gcaggcgaggagaaggagaagacgcaggtgcgtggcgaaaaagaggaggaggcgcgtcca
gggtcagaagaggtggaagtggaggcaggcaaagagcagggggacagcagtaagacggag
caggatgaagacagtaaagagggcccctcagaccttgaaactgaaaagactgagatcacc
cctccatgcgagccaatcgcgagccaacaagaggcgactcgcagcgctcagctcggtccc
ccaaaccccaccccagaggaaccagccgcatccttggctgagcctcagatggccccaaca
accgaaacggtctccggcgctgcgggccaggagccggcggttccttccgccgagatcccc
gattccgccagcctgaacccggccgagcaaaggcaacccggagacgagtcggccgtcaaa
cctcagcccgattcgcaggcggccccgagcagcccgagcgcgcttctcaaggaacagaaa
gaaggcgcgagggggaggaagaaggcaaaggagtcaaagaagggccgcagtcaaagtcgc
agctcttcgtcttcctcttgcggctcctcctccagcggaagctcttcgtcttcatccgct
tcaagccactcatcctcctcctcatcctcgtcgacctcctcgtccagcagtcgaagtcgt
agccgggagagcggcaagcgcagcaaaagaccgtcaggcagggacaagaagaaagaggag
aggagtcaccgcaagaaaggagggagtagtggaggcgcaggaggcaaggatgccaaggaa
gggaggaagaggaagagcaatgaagggaggagcaggtcatatcgcagcgatagggagcag
aaagacagagataggaaggacaagagacgctaa

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