KEGG T10195: HBDW

Herbaspirillum sp. DW155: HBDW_10050

Entry

HBDW_10050        CDS       T10195

Name

(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

hew Herbaspirillum sp. DW155

Brite

KEGG Orthology (KO) [BR:hew00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hew03009]
    HBDW_10050
Enzymes [BR:hew01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     HBDW_10050
Ribosome biogenesis [BR:hew03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    HBDW_10050

SSDB

Motif

Pfam:

Methyltr_RsmB-F RsmF-B_ferredox Ubie_methyltran Methyltransf_31 Methyltransf_25 Methyltr_RsmF_N MTS Cons_hypoth95 Methyltransf_33 TRM5-TYW2_MTfase Methyltransf_12 FtsJ GCD14

Other DBs

NCBI-ProteinID:

BEV14217

Position

1124461..1125723

AA seq 420 aa
MRLPPAIIPHTEELLREVLRFTGPADVTLSRYFRDNPRLGSRERGVIAEAVYGLLRNKTV
LTNFAESGSGPMMRRLALLGLADAVGAESIAGLQEGEAEWLERVAQIDRTRLAPQMRSNL
PPWLWEKLVARMGEEATLQLADAMNRPAPLDLRVNALKADRETVMAELAKAPVACEPTPY
SPLGLRVFKKPALQNLPLFKEGAIEVQDEGSQLLAQIVGAKRGEMVVDFCAGAGGKTLAL
GALMRNTGRLYAFDVSEKRLAKLKPRLARSGLSNVHPVVIAHENDAKVKRLAGKLDRVLV
DAPCSGLGTLRRNPDMKWRQTVETLTEMRAKQGSILASAARLVRPGGRLVYGTCSFLDEE
NDEVIAEFLQSHPDFTLRPMSEVLAEQKIALDTGDYLKLLPHQHQTDGFFAAVLERRAAS

NT seq 1263 nt +upstreamnt +downstreamnt
atgagattgcctcccgcgatcattccccataccgaagaactgctgcgcgaagtgctgcgt
ttcaccggcccggccgacgttaccctgtcgcgctacttccgcgacaatccgcgcctgggc
agccgcgagcgcggcgtgatcgctgaagcggtctacggcctgctgcgcaacaagacggtg
ctgaccaacttcgccgaatccggcagcggcccgatgatgcgccgcctggccctgctggga
ctggccgatgcggtcggtgccgaatccattgccggtttgcaggaaggcgaagccgaatgg
ctggagcgtgtggcccagatcgaccgcacccggttggccccgcagatgcgcagcaacctg
ccgccctggttgtgggaaaagctggtcgcccgcatgggagaagaagccaccctgcaactg
gccgatgccatgaaccgcccggcgccgctggatctgcgcgtcaatgccctcaaggccgac
cgcgagacggtcatggccgaactggccaaggccccggtggcctgcgagccgaccccgtat
tcgccgctgggcctgcgcgtgttcaagaagccggccctgcagaacctgccgctgttcaag
gagggtgccatcgaagtgcaggatgaaggcagccagttgctggcccagatcgtcggtgcc
aagcgcggcgagatggtggtcgatttctgtgccggtgccggtggcaagaccctggcgctg
ggtgcactgatgcgcaataccggccgcctgtatgcctttgacgtctccgaaaagcgcctg
gccaagctcaagccgcgtctggcgcgtagcggcttgtccaacgtgcatccggtggtgatt
gcccacgagaacgacgccaaggtcaagcgcctggccggcaagctcgatcgcgtgctggtc
gatgccccctgcagcggtctgggcaccctgcgccgcaatcccgacatgaagtggcgccag
accgtggaaacgctcaccgagatgcgtgccaagcaaggttccatcctggccagtgccgcg
cgcctggtacgcccgggtggccgcctggtgtatggcacctgcagcttcctcgacgaagaa
aacgatgaagtcattgccgaattcctgcaatcacatcccgacttcacgctgcgcccgatg
agcgaagtgctggccgagcagaagattgcactggataccggcgactacctgaagctgctg
ccgcaccagcatcagactgacggtttcttcgctgccgtcctggagcgtcgcgccgcatca
tga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (13)   
   Pfam (13)   
All databases (14)   

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