KEGG   Helicobacter gastrocanis: NHP190003_07200
Entry
NHP190003_07200   CDS       T10845                                 
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
hgs  Helicobacter gastrocanis
Pathway
hgs00250  Alanine, aspartate and glutamate metabolism
hgs00310  Lysine degradation
hgs00350  Tyrosine metabolism
hgs00650  Butanoate metabolism
hgs00760  Nicotinate and nicotinamide metabolism
hgs01100  Metabolic pathways
hgs01120  Microbial metabolism in diverse environments
Module
hgs_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:hgs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    NHP190003_07200 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    NHP190003_07200 (gabD)
   00310 Lysine degradation
    NHP190003_07200 (gabD)
   00350 Tyrosine metabolism
    NHP190003_07200 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    NHP190003_07200 (gabD)
Enzymes [BR:hgs01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     NHP190003_07200 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     NHP190003_07200 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     NHP190003_07200 (gabD)
SSDB
Motif
Pfam: Aldedh
Other DBs
NCBI-ProteinID: BCZ17438
Position
complement(671191..672618)
AA seq 475 aa
MNFSLLNHPFVSQSPKEGYIPVTNPATLQEIAYVKSVSHAELEQIIANAHKAQKEWAGKL
ALERADILLKLRALLLENLEDLARILTQEMGKPLKEARSEIAYGASYLRWFAEQARRVDG
DILPSVVHNQKILVLKQPIGLCAAITPWNFPSGMIARKLAPALACGCAMVIKPATQTPLS
AYALMVLAQKAGIPEGVLSVVTGETKMLAKLFCESDLVRKISFTGSTEVGKILAAQSAGT
LKKLSLELGGNAPFIVFEDANLEKAAEGIMLSKFRNSGQTCVCANRIYVQKSVYEELSHI
LKSKVEGLKLGNGLEESTTQGPLIDSRAVAKVQEHISDATSKGAQILSGGKPSSLGASFF
EPTILTGVDQQMAVAREETFGPLAPLFSFDTEEEVLEWANATQYGLAAYFYTQNLARVFR
VSEALEYGMVGVNAGHLSTETAPFGGVKQSGMGREGSKYGIEDYLEIKYLNVRLD
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaacttttctttactcaaccacccctttgtaagccaaagccccaaagagggctatatc
cctgttactaaccccgcgaccttgcaagagatcgcctatgtcaaaagtgtcagccacgcc
gaactagagcaaatcatcgctaacgcccacaaggcacaaaaagaatgggcgggcaaactt
gccctagaaagggcggacatcctcttaaaattgcgcgctttgctcttagaaaatttagag
gatttggcccgtatcctaacgcaagaaatgggcaagcccttaaaagaagcccgctcagag
atcgcctatggggcgagttatttgcgttggtttgccgagcaggcgcggcgtgtcgatggg
gacattttgccaagcgtggtgcataaccaaaagattttggtcttaaagcagcccatcggc
ctttgcgcggcgatcaccccgtggaacttcccatcagggatgatcgcacgcaaacttgcc
ccagctctggcctgtggttgtgcgatggtgatcaaacccgccacccaaacgcccctaagt
gcctacgctttaatggtactagcacaaaaagcaggcatccctgaaggggttttgagcgtg
gttacgggggaaactaaaatgctcgccaagctgttttgtgagagcgatttggtgcgtaaa
atcagcttcaccggctcgactgaagtgggtaaaatcttggcggcacaaagtgccggtacg
cttaaaaagctgtctttagagctagggggcaacgcacccttcattgtctttgaagacgca
aacttagaaaaagcggcagaggggatcatgctctctaaatttagaaacagcggacaaacc
tgcgtgtgtgctaaccgaatctatgtgcaaaaaagcgtgtatgaggaactgagccacatt
ttaaaaagcaaggtggagggcttgaaactgggcaatgggctagaggaaagtaccacacaa
gggcctttgatcgactctagagcggtggctaaggtacaagagcacatcagcgatgccacg
agcaaaggggcccaaattttaagcgggggcaagcccagcagtcttggggcaagttttttt
gagcccacgattttaacgggagtcgatcaacaaatggcggtggctagagaggaaaccttt
ggacccctagcccccctctttagctttgacactgaagaagaggttttagagtgggcgaat
gctacacaatacgggctagcggcttacttttacacccaaaatttagcgcgggtctttcgg
gtgagcgaggctctagagtatggcatggtgggggtgaatgctggccatctttccacagaa
accgccccttttggcggagtcaaacaaagtggcatgggcagagagggctcaaaatatggc
atcgaagattatttagagatcaaatatttaaatgtgcgtttagattag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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