KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117761236
Entry
117761236         CDS       T07778                                 
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04145  Phagocytosis
hhip04517  IgSF CAM signaling
hhip04540  Gap junction
hhip04814  Motor proteins
hhip05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117761236 (tubb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    117761236 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    117761236 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    117761236 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117761236 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117761236 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hhip04812]
    117761236 (tubb1)
   04147 Exosome [BR:hhip04147]
    117761236 (tubb1)
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117761236 (tubb1)
Cytoskeleton proteins [BR:hhip04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117761236 (tubb1)
Exosome [BR:hhip04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117761236 (tubb1)
  Exosomal proteins of colorectal cancer cells
   117761236 (tubb1)
  Exosomal proteins of bladder cancer cells
   117761236 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 117761236
NCBI-ProteinID: XP_034440825
Position
5:9326746..9330266
AA seq 460 aa
MREIVHLQIGQCGNQIGSKFWEVISEEHGLNATGNYVGDSSLQLERANVYFSEAQGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVIDRV
RNESESCDCLQGFQLVHSLGGGTGSGMGTLIINKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCLDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRAVSVTELTHQMFDARNMM
VACDPRRGRYLTVAGIFRGKMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFSLMFKRKAFLHWYTGEGMDEMEFTEAEMNLNDLVS
EYQQYQDATADQDSEAECEEEEGPSSSSKVTETVKGTVDV
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtgcatctgcaaatcggacaatgtggaaaccagatcggctccaagttt
tgggaagtgatcagtgaagaacatgggctcaatgcaacaggcaactatgtgggagacagc
agcctccagctggagcgggccaatgtctacttcagtgaggcacaaggtggaaaatatgta
cccagagccctgcttgtggacctagagcccggcaccatggacagtgtgaggggaagccgc
atcggggccctgtttaggccagacaatttcatccatggaaactcaggagccggcaataac
tgggcgaagggccactacacagagggagcggaactggtggagcaggtgattgacagagtg
aggaatgagagcgaaagctgcgattgcctgcagggcttccagctggttcactcattaggg
gggggtaccggctccggcatgggaaccctcatcatcaacaagatccgagaggagtaccct
gaccgcatcatgaacaccttcagcgtcatgccgtcccctaaagtctctgacacggtggtg
gagccgtacaatgctaccctgtcggtccaccaactcctggagaacacagacgagaccttc
tgcctcgacaacgaggccctctacgacatctgtttccgtacgctgaaactgaccacaccg
acttacggggacctcaaccacctggtctctttgaccatgagcggggtcacgacctccctg
agattccccgggcagctcaacgcagacctgaggaaactggctgtcaacatggtgcctttc
cctcgcctccacttcttcatgccaggctttgctcccctgacggcccgtggcagccaacag
tacagagccgtctcggtgactgagctcacgcaccaaatgtttgatgcccgcaacatgatg
gtggcatgcgacccaaggcgagggcgctaccttacagttgcaggtatcttccgtggtaaa
atgtccaccaaagaggtagatgaacaaatgcttgcaatccagcagaaaaacagcaactat
tttgtggactggatcccacataatgtcaaggttgccgtgtgtgacatcccaccccgaggc
ctcaaaatggcttccaccttcattggcaataacactgccattcaggagatattccgccgt
gtgggcgagcagttctccttgatgttcaaacggaaagcctttcttcactggtacacgggg
gaaggtatggatgagatggagttcactgaggcagagatgaacctcaacgacctggtgtca
gagtaccagcagtatcaagatgccactgcagatcaagattcagaagcagaatgtgaagag
gaggagggaccctcatcatcatcaaaagtgacggaaacagtcaaaggaactgtagatgta
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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