KEGG   Humulus lupulus (common hop): 133790388
Entry
133790388         CDS       T11341                                 
Name
(RefSeq) uncharacterized protein LOC133790388
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
hlp  Humulus lupulus (common hop)
Brite
KEGG Orthology (KO) [BR:hlp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hlp03041]
    133790388
Spliceosome [BR:hlp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    133790388
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    133790388
SSDB
Motif
Pfam: MA3 MIF4G BUD22
Other DBs
NCBI-GeneID: 133790388
NCBI-ProteinID: XP_062083984
Position
7:complement(4090493..4093605)
AA seq 578 aa
MDTSNFGKSGGVYIPPFKLARMLKEVDDKCSVEYQRLTWDALRKSINGLVNKVNSTNIKN
IIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFRVVGDLLLRRIVLQ
LKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEGAVGFVTEC
GSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGYPAVRPELDLV
EQEDQWTHEISLEEEIDPEITLDIFKPDPNFLESEKLYEELKKNILGEESEDEEGSDAAS
DGEDDEDDDESDEDEEERMEIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLQIKLEP
GQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNK
LRNVAKFFAHLIGTDALPWHIWAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL
SDPSMLDSYESIFPRDNPKNTRFAINFFTSIGLGGITENLRNFLRNMPSLIIQQKNAADS
NDESSGSSESDSSSSESESSEESDSGKDEKKRRKRRRR
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggatacatcaaattttggtaagagtggaggagtttacattcccccatttaagttggct
aggatgctgaaagaagtcgatgataaatgtagtgttgaataccagcgattaacctgggat
gccctccggaagagcataaatgggcttgtgaacaaggtcaattctacaaacataaaaaac
attattccggaacttttctcagagaatctgatcaggggcaggggtttgttctgccgttct
tgtatgaagtcacaaatggcgtctccaggatttacagatgtctttgctgctttggttgct
gttgtcaacaccaagttccgtgtggttggtgatctattattgagaaggatagtattgcag
cttaaacgagcatataagcggaatgacaagccacaattactggctgctgttaagtttata
gcacatctggtaaaccaacaagtggcacacgagattatcgctttggaattgctcactgtg
cttctagaaaacccaactgatgacagcgttgaaggtgctgttgggtttgtgacagaatgt
ggttctattctccaggatctctcacccaaaggattgcacggtatttttgaacgattccgt
ggaattctccacgaaggagaaatagacaaaagggttcagttcttaattgaaggcttattt
gcagttcggaaagcaaagtttcagggttacccggctgtgcgcccagaactggaccttgtg
gagcaagaagatcagtggacacatgagatttctcttgaagaggagatagatccagaaatt
acccttgatattttcaaaccggaccctaatttccttgagagtgagaagctttatgaagag
ttgaagaaaaacatacttggagaggagtctgaggatgaagaaggttcagatgcagcttca
gatggcgaggatgatgaagatgatgatgaatctgacgaagatgaagaggagcggatggaa
ataaaggatgagacagagacgaatcttgtaaatcttcgtaggacaatatacttgacaatt
atgtccagcgtggactttgaggaggctggtcacaagctcctccagattaaacttgagcct
ggtcaagagatggagctttgcatcatgcttttggaatgttgcagtcaagagagaacctac
ttaagatattatggtcttctggggcagaggttctgcatgattaacaaagtgcaccaggaa
aattttgagaaatgctttgtccagcaatactctatgattcatcggctcgaaacaaataag
ctgcgtaatgtggctaagttttttgcccatttaatcggtacagatgctttgccgtggcat
atatgggcctacatccgtttaaccgaagaggataccacttcttcatctcgtatctttatc
aagattcttttccaggagttatctgagcatcttggtatccggttgctaaatgaacggctc
tcagacccctcaatgcttgattcatacgagtctatatttccaagggataatccgaagaac
acccgatttgccatcaacttcttcacatccattggtcttggaggtatcactgagaatttg
agaaattttttgaggaacatgcccagccttattattcaacagaagaatgcggcggattcc
aacgatgaatcatccggtagctctgagtccgactcatcaagttcggagtcagaatcttca
gaggaaagtgattctggtaaggatgaaaagaagcgtaggaagcgccgcaggcgatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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