KEGG   Hydra vulgaris (swiftwater hydra): 100202752
Entry
100202752         CDS       T01080                                 
Symbol
LOC100202752
Name
(RefSeq) poly(A) polymerase type 3 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100202752 (LOC100202752)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmg03019]
    100202752 (LOC100202752)
Enzymes [BR:hmg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     100202752 (LOC100202752)
Messenger RNA biogenesis [BR:hmg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     100202752 (LOC100202752)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central ssDNA-exonuc_C
Other DBs
NCBI-GeneID: 100202752
NCBI-ProteinID: XP_047132358
Position
09:complement(18252522..18307278)
AA seq 690 aa
MTSSATNTAATATTKQYGITSPINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMV
VLGKLNKLALEWIVKTSIAKNMPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRH
IERADFFGSFYEFLKNREETKDLRAVEEAFVPVIKMNFDGIEIDLLFARLALTTIPEDLD
LLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLRAIKLWAKNQFVYSNVLGF
LGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPVLLKQMPTENKLNFPIWDP
RMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRGFQVMEEIYSKTSTWKALF
APANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVNLERNQFVKLAHVNPKSYD
PILKSESGTVSRWFIGLEFQKPEGTENVNVDITAEIQYFTSTVHKQACQIAIFREGMRTE
ARHVKKKQLSNYLPNTVLRLKKKSSLNGGSEKQRSSLSECYSEKGESNDAFSQDSMQEAN
DLNMSEKLFVNDPPSSNEEIETLYQNDTPKQQGLKQHGVKRPSSPICLDESPLKRIREQM
NDTAKDLNDTSKQQGLDKHGVKRPSSPISLDASPIKRIREQMDNELVDDGSDIPDTEVLI
PQDELLDTNQLQPIQVNNVKKGAIKLRLNK
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgacaagttcagctacaaatacggcagcgacagcgacaacaaaacaatatggaataact
tcacctataaatttgtcaggtcctaaagaaattgatgaagaactcacaaaatctctggaa
gaaacattgaaagattatggggtctttgagacacaagagcaaatccaacacaggatggtt
gttttgggaaaactgaacaaactagctttagaatggattgttaaaacgtcaatcgctaag
aatatgccagagtctgttgcaaattctgttggaggcaaaatttttacatttggatcattt
cgtcttggagttcacaccaaaggtgctgatattgatactttgcttgttgcaccaaggcat
attgaacgagcagatttctttggttcattttatgaatttttaaaaaacagagaagaaaca
aaggatttgcgggctgtagaagaagcatttgttccagtcattaaaatgaactttgatggt
attgagattgacttgttatttgcacgacttgctcttactacgattccagaagatttggat
ttattagatgaaaatcttctcaaaaatttagatgctcgttgtgttcgcagtttaaatggt
tgcagagtcactgatgaaattcttcatttagttcctaatattgccaatttcagaatgaca
ctgagagctattaaactttgggctaaaaatcaatttgtttattcaaatgttcttggattt
cttggtggtgtgtcttgggccatgcttgtagctcgaatatgtcagctttatccaaatgct
attgctgcaactcttgtgcaaaagttttttctgatttattcaaaatgggcatggcctcaa
ccagtccttcttaaacaaatgccaactgaaaacaaacttaattttcctatttgggatcca
agaatgaatccagctgatcgatttcaccttatgccaattattactccagcatatccacaa
caaaattctacatttaatgtgtcaatgtctagtcgtactgtaatgcaagatgcatttaag
cgaggttttcaagtaatggaagagatttattctaaaacctcaacttggaaagcgttattt
gcaccagctaattttttccaaaaatataaacattacattgttttgagtgcttattccaac
agcagtgagcatcatctagaatgggaaggtttggttgaatcaaaaattcgtatacttatt
gttaatcttgaaagaaatcaatttgtaaaacttgctcatgtgaatcctaaatcgtatgat
cctattcttaaatctgaaagtggcactgtatctcgttggtttattggtctagaatttcaa
aaaccagaaggcactgaaaatgtaaatgtggatatcacagctgaaatacaatactttacc
agcactgtacataaacaagcttgtcaaattgcaatatttcgagaaggaatgcgaacagag
gccagacatgtaaaaaaaaagcaattaagtaattatcttccaaacacagtattaagattg
aaaaaaaaaagctctttgaatggggggagcgaaaaacaaagaagttctttatcggaatgt
tattcagagaaaggtgaatcaaatgatgcattcagccaagattctatgcaggaagctaat
gacctaaatatgtcagaaaagttatttgtaaacgatcctccatcaagtaatgaagaaatc
gaaacactttatcaaaacgatacaccaaaacaacaaggacttaaacaacatggagtaaag
cgaccaagttcgccaatatgcttagatgaaagtcctttaaaaagaataagagaacaaatg
aatgatacagcaaaggacttgaatgatacatcaaaacagcaaggacttgataaacatgga
gtaaagcgaccaagttcgccaataagtctagatgcaagtcctataaaaagaataagagaa
caaatggataatgaattagttgatgatggaagtgatattccggatacagaagtattgatt
ccacaagatgaattattagacactaaccaattacaaccaatccaagtgaacaatgttaaa
aaaggagcaattaaacttagacttaataagtga

  All links  
Gene (60)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (91)   

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